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Detailed information on CNT30196858


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONBNAT004661, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639555Pisum sativumNymphaea colorata80.1387.1293.951488forward
CNT30536068Pisum sativumEucalyptus grandis90.0948.5891.631673reverse complement
CNT30513456Pisum sativumJuglans regia90.252.7792.661675forward
CNT30500477Pisum sativumCoffea canephora78.6280.1894.041460forward
CNT30269781Pisum sativumChenopodium quinoa90.0956.6291.211673forward
CNT30730500Pisum sativumCorchorus capsularis60.6994.9593.791127forward
CNT30630109Pisum sativumVigna unguiculata90.7453.4692.341685forward
CNT30503447Pisum sativumNicotiana attenuata61.0167.7295.231133reverse complement
CNT30711335Pisum sativumGlycine max19.9894.6492.99371reverse complement
CNT3044711Pisum sativumPrunus dulcis25.6910095.39477reverse complement
CNT3090649Pisum sativumSolanum tuberosum89.9361.0893.411670forward
CNT30193801Pisum sativumSecale cereale70.7192.9992.311313forward
CNT30291213Pisum sativumTriticum aestivum82.5544.1392.431533forward
CNT30588765Pisum sativumMusa acuminata32.2685.8293.82599reverse complement
CNT30511396Pisum sativumSolanum lycopersicum32.5366.0191.39604forward
CNT30460907Pisum sativumSaccharum spontaneum83.7946.792.611556forward
CNT3017045Pisum sativumZea mays83.7457.6892.031555reverse complement
CNT30655263Pisum sativumRosa chinensis89.4592.0290.251661forward
CNT30206724Pisum sativumHelianthus annuus79.4868.0294.721476forward
CNT30689042Pisum sativumTriticum urartu83.7953.9992.671556forward
CNT30720907Pisum sativumTriticum spelta55.09100.291.791023reverse complement
CNT30596725Pisum sativumOryza meridionalis83.7445.0692.541555forward
CNT30154922Pisum sativumPrunus persica88.9197.7589.951651reverse complement
CNT30410430Pisum sativumPapaver somniferum74.3147.794.641380reverse complement
CNT30646402Pisum sativumCannabis sativa57.384.11891064reverse complement
CNT30319706Pisum sativumAsparagus officinalis89.9358.1193.231670forward
CNT30332807Pisum sativumDioscorea rotundata74.9684.2694.181392reverse complement
CNT30148090Pisum sativumBrachypodium distachyon75.0747.9992.541394reverse complement
CNT30103033Pisum sativumOryza rufipogon81.4897.5591.011513reverse complement

Expression of CNT30196858

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MNGAKRFAEAVGCKNESVGERSALERSTRASRVGRSGSENVGLSNENIGENPMPRKPKDSSARFVHGG*

>peptide 2 (48 aa)
MGDKLHRREGNNPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHPSKSA*

>peptide 3 (45 aa)
MPRAKIRVRVRGTHSGAKVIDAILPGKVQTTYNKRVPVPETDTGG*

>peptide 4 (34 aa)
MPYSQEKFERPTTRGYLYRKPTQVTPCFFRVSKG*

>peptide 5 (52 aa)
MPRAKIRVRVRGAHSSAKVIDAILPGKVRTTYNKRVPVPETDTGDSLFFQGK*

>peptide 6 (73 aa)
TRKGLWWIPRHPETRKGVVSDEMLRGVENKRRSEDSRIGQPFELLLNSRAGKRQPGELKHLSSQRKRKQKRFP*

>peptide 7 (29 aa)
MGHVKSRVNQQGPPCKAKYSWVTDSEVVP*

>peptide 8 (44 aa)
MPIEPRASWFSPKCVEAQQLTGHLGVKHCFGAGPRRAVPNRGKL*

Sequence

>CNT30196858
AACGAGGAAAGGCTTATGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCC
GAGGATTCCCGAATAGGTCAACCTTTCGAACTGCTGCTGAATTCACGAGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAA
GAAAGCAAAAGCGATTCCCGTAGCAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTA
GGCGAAGCAGTCGAATGTTGCACCCTAGATGGTGAAAGTCCAGTAGCCGAAAGTATCACTAGCTTATGCTCTGACCCGAGTAACATGGGGCACGTGAAAT
CCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGTGAAGTAGTACCGTGAGGGAAAGGGGAAAAGAACCCCTGGCG
GGGAGGGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCTGGGGCTCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCATAGGC
AGTGGCTTGGTTAAGGGAAACCACCGGAGCCGTATCGAAAGCGAGTCTTCATAGGGCTATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCAT
GACCAGGATGAAGTTTAGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAAAATCAGTGGATGAGTTGTGGTTAGCGGTGAAATGCCAATCGAA
CCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTTGACTGGACATCTAGGGGTAAAGCACTGTTTCGGCGCGGGCCCGCGCAGAGCGG
TACCAAATCGAGGCAAACTCTGAATACTAGATATGACCCGACGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACA
ACCCAGATCACCAGCTAAGGCCCCTAAATGATCGCTCAGTGATAAAGGAGGTAGGAGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTC
AAAGAGTGCGTAATAGCTCACTGATCGAGTGCTCTTGCGCCGAAGATGAACGGGGCTAAGCGATTTGCCGAAGCTGTGGGATGTAAAAATGAATCGGTAG
GGGAGCGTTCCGCCTTAGAAAGAAGTACCCGCGCGAGCAGGGTTGGACGAAGCGGAAGTGAGAATGTCGGCTTGAGTAACGAAAACATTGGTGAGAATCC
AATGCCCCGAAAACCTAAGGATTCCTCCGCAAGGTTCGTCCACGGAGGGTAAGTCAGGACCTAAGATCAGGCCGAAAGGCGTAGTCGGTGGACAACAGGT
TAATATTCCTGTACTGCCCCTTGTTGGTCCCGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATCGGTTCAAGAACATAAGGTGACTCCCTGTT
TTTTCAGGGTAAGTAAGGGGTAGAGAAAATGCCTCGAGCCAAAATTCGAGTACGAGTACGAGGCGCGCACTCTAGCGCTAAAGTAATTGATGCCATACTC
CCAGGAAAAGTTCGAACGACCTACAACAAGAGGGTACCTGTACCGGAAACCGACACAGGTGACTCCCTGTTTTTTCAGGGTAAGTAAGGGGTAGAGAAAA
TGCCTCGAGCCAAAATTCGAGTACGAGTACGAGGCACGCACTCTGGCGCTAAAGTAATTGATGCCATACTCCCAGGAAAAGTTCAAACGACCTACAACAA
GAGGGTACCTGTACCGGAAACCGACACAGGTGGGTAGGTAGAAAATACCTAGGGGCG