Detailed information on CNT30196774


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30300142Pisum sativumTriticum aestivum7.4220.586.15260forward

Expression of CNT30196774

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MTRIKMKKEKRNYNKGNGKSTKLKNSLSSG*

>peptide 2 (34 aa)
MVLLWYTKLMQYIQLQQPNCFSLRGLRYIDQTLS*

>peptide 3 (32 aa)
MYPYEMTQFRPPPNTKKSLGHCKEEGVFLGVS*

>peptide 4 (43 aa)
MKHIIVFRFQMKEQKSFNNRRNTKVSNTNLVKKQQFGNRYIYI*

>peptide 5 (60 aa)
MQRINEFKIIHNPRVHQNKPNCFMLHNPTNHRAKCSRQSSRNIPYDVYKKLMKKPKKIKS*

>peptide 6 (61 aa)
MKVQQQPISDSCAQLGSPYANQVLAPIADSLRDTHMGEKIFNFILYITYDKNKNEKRKKKL*

>peptide 7 (61 aa)
MILQTTLISRSMLQKESTKVVLIYPELEKKCTVKLKFENQNVREKNYIYGKKTLRLYSYKL*

>peptide 8 (35 aa)
MNQRQKIRRKKLIYLPEKIFDLLIYQELLTHCITD*

>peptide 9 (37 aa)
MTKVDVAYQNQTKIERRRVLILCSLIEIGRELCSKSF*

>peptide 10 (41 aa)
MASGNQEKRESRSQEQLANYGIKKSKSYPFLQPSITKKTSS*

>peptide 11 (36 aa)
MSTTPTWNSQRNRENMTLIYTKKHEKLIIVIVEITR*

Sequence

>CNT30196774
ATTAAGCCTACCATGGGTTCCAAATGCAAACTCAACAGATCTGACAAGTAGAGGCTAAGTATCAAAATAAAACAAAAACTGAAATGTAAAGAGTCTTGGT
AGATATGACCAAATTAAAGCATAGCAACAATAAAGAGTAGGCAACACAACCTACAAAAGAACAAATTTACCATCCTATTTGCAAGGACATGTACCCATAT
GAAATGACACAGTTTCGGCCTCCTCCTAATACAAAGAAGTCCTTGGGCCACTGTAAGGAAGAGGGTGTCTTCTTAGGAGTATCATAATCATAAATCAAAA
ATAGCAATGAAGACACAACAGCAAAAGAAGAATATAGAAAAACCTCTCCCAACAAAGTTAAGTTGTCCCTGAACAAATCATCAGAATAAACAGCACACAT
ACGGCATCACCAAGTTGTCTAAAATCCTATATGAAAAGGCACAGACTTCTTCCAAAATGAAGCATATAATAGTATTCAGGTTCCAGATGAAGGAACAGAA
AAGCTTCAACAATAGAAGAAACACAAAAGTTTCAAACACCAACTTGGTGAAGAAACAGCAGTTCGGGAACAGATACATATACATATAAGAAAAAAATTAT
ATCCAAACGATGAATGAGAAAGTATGATAATCTCAATAGACACAAATGGATAACATGCATACGGAAATGTTCATATCTAAATTCAAATCCCTAAATCAAG
ACTAGAAGCCCTTAAATATATAATACAGCGAGGAAAACATGAATATGTTCTAGTTTAATTTGTTCACAGCATAGAGGCAGTCATCTCCAATTTCCCTAAC
TTCAAACAGGAAAATTAACATGGTGCAGTGAGACTAGGTGCAGTTAGACTAGAAAAGAATGGTACTTCTGTGGTACACCAAACTCATGCAATACATACAA
CTACAACAACCTAATTGTTTCTCACTACGTGGTCTCCGCTACATAGATCAAACTCTATCATAATATTCTATCCAAGACCATTGTTTTTAACACACACATG
TACATCAATATTTCACACTGATATTTCCTGTGACATTTAGTGGTCCACAAGAAAAAAAGTTAATAGTAGCATGATTCTCCAAACAACGCTAATCAGTAGA
TCGATGTTACAAAAAGAGTCCACCAAAGTTGTCCTAATTTATCCAGAATTAGAAAAAAAGTGCACTGTCAAATTAAAGTTTGAAAACCAAAATGTAAGAG
AAAAGAATTACATATATGGTAAGAAAACTCTAAGGCTTTATAGTTATAAGTTATAACCACCCCCTCACTGTACTCAATAAACCTATCCCTCACGTGTAAC
ACCCAAGTGAAAATCATAAAGGAATAAGGCAATAAAACTATGCAGAGAATTAATGAATTCAAAATAATCCACAATCCAAGAGTTCATCAAAATAAACCTA
ATTGCTTTATGTTGCACAATCCAACCAATCATCGAGCAAAATGTTCACGACAATCATCTAGGAATATTCCATATGACGTCTACAAGAAACTTATGAAGAA
ACCCAAAAAAATAAAATCGTAATATATACAAAGAAACATGACAAATTAATAGTCATAGTAGAGATCACCCGATGAAGTACAACAACAACAATAACTAATT
GCAGCCTCTTGTGTCATTTAGGCCCCCCTTTTGCCAAGTTCTTGCACCAGTTGCAGATTCTGTGAGGATACCCATATGGGAGAGGTGATTTTTAGTTTCA
TAACCTCTCTCCCCTGAAACACCAAGCAGAATGTCTACGACGCCTACATGGAACTCACAAAGAAATCGAGAAAACATGACCTTAATATATACAAAGAAAC
ATGAAAAACTAATAATAGTCATAGTAGAGATCACCAGATGAAAGTACAGCAACAACCAATTTCAGACTCTTGTGCTCAATTAGGCTCCCCTTATGCCAAC
CAAGTTCTTGCACCAATTGCAGATTCGCTGAGGGATACCCATATGGGAGAGAAGATTTTTAATTTCATCTTATATATCACATATGACAAGAATAAAAATG
AAAAAAGAAAAAAGAAATTATAACAAAGGAAATGGCAAATCAACAAAATTAAAAAATTCCTTATCCTCGGGATAGAGATGTTCCCTAAAATCCGGAATGG
TTTCTTGTATGCCTCCAACTAAAACATGACGCACCATTAGAGGACAAATATCCCAAATACCAAAACAAATAGACCATATGTGACCAAAAAATAGAATGTT
CTTTCCCAAAGCTATAGACAGAAAGAATGTGAACCTTGACTGCAGATATAATCAGGTTCCATAGGTTATCTCCTGTGTAATATCCAAACACAGAGACTAA
GGACATGACAAAAGTAGATGTTGCGTATCAAAATCAAACAAAGATCGAAAGGAGAAGAGTATTGATTTTGTGTAGCTTAATCGAGATTGGAAGAGAATTG
TGCAGCAAAAGCTTCTAATTCTGAGAATTGTGCTAATTCCAATTTTAATTTACCCGCTACTTGTTTCATGGCTTTTATTTGATCCGCCGATCCAACTCTG
GAATCGGAAATACCCACATTAATTACAGGTCTGATCCCAGCATTGAATAAATCGGCATATAAGAATATTTGACCATCTGTAATAGAAATGACATTAGTAG
GAATATAAGTTGAAACATCTCCGGATTGGGTCTCAACTATTGGTAAAGCAGTCATACTTCCTTCACCTAACTAAGAACTTAGTAGAGATGACCAAACTAG
AGTGTAGCAAGTACATAGCCCACAAAGTATGAGGATTCATAGGGAACAAAATTCCGCCCAACTCAAGAGATCATGTAATGATAATTTTGGTTTCATCCCA
ATAGAAACATCATAACAGAAGATTATAGAAAACCTATCCAGAAAAAGTTAAGTTCTCCCCATCCAACCAATCATCATAACAAACTGACACATCTCGTAAA
AAAAACTCTTTAACATGGAAGGGGAAAAGTATTCCATAATCTTGTATGTTAAGCCAGACTATAACACAGTTCCTAGTATAGAAACGCACAAAAGCTTATA
GAAAACAAAAACCACCAGCATGTAAGTAATAAAATCCCTAGGATGAATGAGAAAGTGTGAAAATCTAAGCAAGTCTCTTTGACACCAAGTTAAGTAGTTC
ACACCGCAGAAGAACTCGTCATCTCCAATATCTCCAAATTCAGACTGCAAACACTCAACACCAAATGAATCAACGCCAAAAGATTCGGAGAAAAAAATTG
ATTTATCTACCGGAGAAAATTTTTGATTTACTTATATATCAAGAACTCTTAACTCACTGCATAACGGATTAGACGCCGTCTCTCAATTATCAAAATCGTT
AATAACAGCAAGAACTGTGAAATTAATGGCATCAGGAAATCAAGAAAAGAGAGAAAGTAGGTCACAAGAACAACTAGCAAACTATGGAATCAAGAAATCA
AAATCATACCCTTTCCTGCAACCATCAATAACAAAAAAAACCTCTTCATAGTAGCAGCTAAATCAAGAAAGAAAAGGACGACGAACCCTAAAATCGATAT
ATCAC