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Detailed information on CNT30196709


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9BBP3|NU4C_LOTJA, E-value = 0.0

BLAST vs NONCODE:
NONTPRT004570, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30184264Pisum sativumSecale cereale37.939.1282.81669forward
CNT30221821Pisum sativumHordeum vulgare37.953.6981.76669forward
CNT30394664Pisum sativumTriticum turgidum37.9669.1483.58670forward
CNT3017910Pisum sativumZea mays75.9255.5681.721340forward
CNT30231113Pisum sativumAnanas comosus32.876.6983.25579forward
CNT3055427Pisum sativumAmborella trichopoda20.4513.0880.33361forward

Expression of CNT30196709

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLPVLIICRLKAYKCCNVPLRGYLVTMYVRV*

>peptide 2 (31 aa)
MPGNAREAIDKIVKIVNIFGIGIAIPPISSR*

Sequence

>CNT30196709
CTTATATTGTGATCTATTTTGAATTAATTGTAAATGTGCATGAACATTATGAATAATATGAAACTAGAAAAATATTCACAATGTGTTTTTTTTTTAATCC
ATCAAAAATGAGATAGAATAGCTTCAACCTTGTCAACCGAAAATGAGAAAATGAAATCGGGGTAAACACCAATACCTATTATGGGTATAAGGATAGAAAT
AGAAATAAATAATTCTCTGGGCCCAGAATCAAAAAAATAAGAGTTTGGTGTATTCAAAAACTTATATCCATAGAACATCTGCCGTACGATTGATAATAAA
TAAATCGAAGTTAATATCATTCCAATTGCTGTTACAAAAGTAATTAGTATTTTCATCATGAAAAGATATTTTTGACTACTAATTATTCCAAAAAAAACTA
TCAATTCTGCAACAAAACCGCTCATGCCAGGCAATGCAAGAGAAGCCATTGATAAGATAGTAAAAATTGTGAATATTTTTGGCATTGGGATAGCCATTCC
GCCCATTTCGTCAAGATAAAGAAGATGCACTCTATCATAACTAGTTCCTGCCAAGAAAAAAAGTGCAGCGCCAATAAATCCATGAGATATGATTTGTAAA
ATGGCCCCGTTGAGACCAGTATCACTTATGGAACCAATTCCTATAATTAGAAAACCCATATGAGATACCGAAGAATAAGCTATTCTTTTTTTTAGATTAC
GTTGACCAAAAGATGTTGAAGCGGCATAGATTATTTGAATAGAACCTAATATCATTAACCAGGGGCAAAATATGGAATGAGCGTGGGAAACCAATTCCAT
ATTAATTCGAACCAACCCATATGCTCCCAGTTTTAATAATATGCCGGCTAAAAGCATACAAGTGCTGTAATGTGCCTCTCCGTGGGTATCTGGTAACCAT
GTATGTAAGGGTATAATTGGCGATTTGACAGCAAAAGAAATCAGAAATGCCGTATAGAATATTATTTCTAGTGCCACGGGATACGATCGATTAATTAATG
TTTCAAAATTAAATGTTGGTTTATTAGAGCCATATAAACCGATACCCAGAATTCCCATTAATAAAAAAACAGAAGCTCCTGCAGTGTACAAAATAAACTT
AGTAGCAGAGTAGAAACGTTTCTTTCCCCCCCAGATGGATAAAAGTAGATAAACGGGGATTAATTCCAATTCCCACATGATGAAAAAAAGTAAAATGTCT
CGAGAAGAAAATGGTCCTATTTGACCGCTATACATTGCTAACATCAGGAAATAGAATAATTGGTATTCTCGAGTAACCGGCTGAGCCGCTAAAGTGGCTA
AAGTAGTTATAAATCCTGTTAGTAAAATGGGTCCTATAGAGAGTCCATCTATTCCTAATCTCCAGTCAAAATCAAAAAAATGGATCCATTTATAATTCTC
CGTCAGTTGAATTAGTGGATCATCCAATTGGAAATGATAAGAAAATGCATAGGTTGTTAGAAGGAGATCGATTAAGCATATACAAATGCTATACCACCTA
ATTACCTTATTTCCCCTATGAGGAAAAAAGAAAATTAAGGAACCTGCGGCTATTGGCAAAACAACAACGATTGTTAACCAAGGAAAATAATTCGTGATAA
AAATAAGATACACTTGGGCCAGAAAAGCCCGTGCTCAAAATAGAAAAAAAAGATTTTCTATTTTATTTGGAGCACGAGTTTTTGCCAGTAAAAAACGTAT
TCGTGTGGTGTTGTTTGAAACGAATCAATAAGCTAGACCCATACTTCGAGTTGTTTCATGCCATA