Detailed information on CNT30196701


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30330128Pisum sativumDioscorea rotundata28.568.0897.13593reverse complement

Expression of CNT30196701

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MPPTVPVNHYSDPEGQHNRIRILWCYPMLMYPERRLALSTLISSK*

>peptide 2 (44 aa)
MKFQRLPGPVGQGYRLVEYISVARVRPRTSKGITDLLLPQTSVA*

>peptide 3 (43 aa)
MIRFSGLLTTSRAANRPRRRNPNTSPDHSIGRSDGRCVQRAGT*

>peptide 4 (32 aa)
MKYECPRLSLLIITPIPKANTIGSESCGVIPC*

>peptide 5 (31 aa)
MPMASWGVKHLKPTACVQTNSRVGLHIRHRQ*

>peptide 6 (63 aa)
MIGLVGHTTTIYHGTPYQGLNFQPTMRRKRAHGEANIHPAQYLSKGNLQEASICDTQADVPST*

>peptide 7 (67 aa)
MVHGILQFTPSIAFRYVLHRCKSLDIRCRESFYINVSKHNPHGNRLRCHADVLRAKLNFLDAFSVGV*

>peptide 8 (82 aa)
MVHGILQFTPSIAFRYVLHRCKSLDIRCRESFYINVSKHNPQTCPQPNGIGRNLRSKTRWFTGFCNSHQVSHFATFFIDARA*

>peptide 9 (45 aa)
MASGATCVQRLDGSRDSAIHTKYRISLRSSSMQEPRYPLPRVILY*

>peptide 10 (58 aa)
MCQNTTRRRALNLMASGATCVQRLDGSRDSAIHTKYRISLRSSSMQEPRYPLPRVILY*

Sequence

>CNT30196701
CGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATGCTTAAATTCAGCGGGTAGCCCCGCCTGACCTGAGGTCT
CATCACGAGCGTTTAGAAACGCAAATGGGTAAAAGAGCCCAAATTTAATAGAGCAACACATGATTGGTCTCGTGGGTCACACAACCACCATTTATCATGG
CACACCCTACCAAGGTCTCAATTTTCAACCAACCATGAGACGAAAGAGAGCTCACGGGGAGGCCAACATCCACCCTGCACAATACCTGTCAAAAGGAAAT
TTGCAGGAGGCTTCAATATGTGACACCCAGGCAGACGTGCCCTCAACCTAATGGCATCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTC
TGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCAAGAGCCTAGATATCCGTTGCCGAGAGTCATTTTATATTAATGTGTCAAAACA
CAACCCGCAGACGTGCCCTCAACCTAATGGCATCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCAT
TTCGCTACGTTCTTCATCGATGCAAGAGCCTAGATATCCGTTGCCGAGAGTCATTTTATATTAATGTGTCAAAACACAACCCGCACGGAAACCGTCTCCG
GTGCCATGCAGATGTGCTCAGAGCAAAGTTAAATTTCCTTGACGCATTCAGCGTCGGGGTTTGAGTTTTGGCACAGAAGAGAACGCATTTTGTCGTTCCC
CTCCGATGCCAATGGCAAGTTGGGGTGTGAAACACCTCAAGCCCACCGCATGTGTTCAAACTAATTCACGTGTTGGACTGCATATAAGGCATCGACAATG
ATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCACAACGTCGCGGGCAGCGAACC
GCCCACGTCGCCGCAATCCGAACACTTCACCGGACCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGA
TGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCA
AGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAA
GCGGCCATAGTCCCTCTAAGAAGCTGGCCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAA
TCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGTTGTTCGTC
TTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGA
TCAGAATCCTGTGGTGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGAGGCACGACCC
GGCCAATTAAGGCCAGGAGCGCATCGCCGGCAGAAGGGACGAGCCAACCGGTGCACACCAGAGGCGGACCGATCAACCCAACCCAAGGTCCAACTACGAG
CTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTT
AGATTGTACTCATTCCAATTACCAGACTCAATGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTTAGGATTGGGTAATTTGCGCGCCTGCTG
CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATG