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Detailed information on CNT30196698


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30495448Pisum sativumOlea europaea13.5524.185100forward
CNT30174921Pisum sativumVigna angularis22.6334.2284.43167forward
CNT30724806Pisum sativumLupinus angustifolius23.852180.68176forward

Expression of CNT30196698

Peptides detected in this lncRNA

>peptide 1 (96 aa)
MVLSHALNAYHSTPSHIFITTHHCFLFPFSLSLSQYINSTITIHIYLIIYTHHIDPFLFHPKVSLFKKLLNPFISGVKSVLFQNKTIQQETSNLRK*

>peptide 2 (62 aa)
MGLGRLVGTLKSKIKSLKLKKPYNKVEKSESMRVEIKSRKARKLIEETLKIADSPKTKSFNF*

>peptide 3 (31 aa)
LFRFHKFITISYLWSFPMLLMLTIPHPLTYS*

Sequence

>CNT30196698
ATTTGTTTAGATTCCATAAATTCATTACCATATCATATCTATGGTCCTTTCCCATGCTCTTAATGCTTACCATTCCACACCCTCTCACATATTCATAACT
ACACATCATTGTTTCCTCTTCCCTTTCTCTCTCTCTCTCTCTCAATATATAAATTCCACAATCACAATTCACATATATTTAATTATATATACTCATCACA
TAGACCCTTTTCTCTTCCATCCTAAAGTATCCTTATTTAAAAAACTCTTGAATCCCTTCATAAGTGGAGTGAAGAGTGTTCTTTTCCAAAACAAAACAAT
ACAACAAGAAACATCAAATCTAAGAAAGTGATTATGGGTCTTGGAAGATTAGTAGGGACACTAAAGTCCAAAATAAAGTCATTGAAATTGAAGAAACCTT
ACAACAAGGTTGAGAAGAGTGAGAGTATGAGAGTGGAGATAAAGAGCAGAAAAGCCAGGAAGCTTATTGAAGAAACTCTCAAGATTGCTGATTCACCAAA
GACAAAATCTTTCAACTTCTGATCCTAGCGTCTACCTTAATAACATGTTCAGCGTATGTAACAAACCTTTTTAAGGTTCTTTTCATGTTCTTTGTATGTA
ATCTAATATAATTTCAATGAAATATAATTAGCTTTTCATTATTTTTCTTCTAAACTATTCCAAGTTTTTCCATTATGTATGATTATAGAATATTACTCTT
ATTGTGAGATTGATGTGAAGCATGAAAAGTTTGCTTAA