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Detailed information on CNT30196674


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONBNAT004661, E-value = 3e-154

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3068134Pisum sativumLeersia perrieri30.0791.7187.95332reverse complement
CNT30574740Pisum sativumOryza barthii25.3656.9192.5280forward

Expression of CNT30196674

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MPRAKIRVRVRGTHSGAKVIDAILPGKVQTTYNKRVPVPETDTGG*

>peptide 2 (44 aa)
MPIEPRASWFSPKCVEAQQLTGHLGVKHCFGAGPRRAVPNRGKL*

>peptide 3 (68 aa)
MNGAKRFAEAVGCKNESVGERSALERSTRASRVGRSGSENVGLSNENIGENPMPRKPKDSSARFVHGG*

>peptide 4 (48 aa)
MGDKLHRREGNNPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHPSKSA*

Sequence

>CNT30196674
GTCTTCATAGGGCTATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGTTTAGGTGAAACTAAGTGGAGGTCCGAACCG
ACTGATGTTGAAAAATCAGTGGATGAGTTGTGGTTAGCGGTGAAATGCCAATCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCA
GTTGACTGGACATCTAGGGGTAAAGCACTGTTTCGGCGCGGGCCCGCGCAGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCCGACGG
GTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAACCCAGATCACCAGCTAAGGCCCCTAAATGATCGCTCAGTGATA
AAGGAGGTAGGAGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTCAAAGAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAA
GATGAACGGGGCTAAGCGATTTGCCGAAGCTGTGGGATGTAAAAATGAATCGGTGGGGGAGCGTTCCGCCTTAGAAAGAAGTACCCGCGCGAGCAGGGTT
GGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGAAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGATTCCTCTGCAAGGTTCGTCCACG
GAGGGTAAGTCAGGACCTAAGATCAGGCCGAAAGGCGTAGTCGATGGACAACAGGTTAATATTCCTGTACTGCCCCTTGTTGGTCCCGAGGGACGGAGGA
GGCTAGGTTAGCCGAAAGATGGTTATCGGTTCAAGAACATAAGGTGACTCCCTGTTTTTTCAGGGTAAGTAAGGGGTAGAGAAAATGCCTCGAGCCAAAA
TTCGAGTACGAGTACGAGGCACGCACTCTGGCGCTAAAGTAATTGATGCCATACTCCCAGGAAAAGTTCAAACGACCTACAACAAGAGGGTACCTGTACC
GGAAACCGACACAGGTGGGTAGGTAGAAAATACCTAGGGGCGTGAGACAACTCTCTCTAAGGAACTCGACAAAATAGCCCCGTAACTTCGGGAGAAGGGG
TGCC