Detailed information on CNT30196655


BLAST search results

BLAST vs Swiss-Prot:
sp|P68430|H32_ONOVI, E-value = 7e-68

BLAST vs NONCODE:
NONATHT004002, E-value = 3e-63

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631185Pisum sativumVigna unguiculata23.118.9781.73104forward
CNT3090157Pisum sativumSolanum tuberosum43.1130.0883.51194forward
CNT30644610Pisum sativumCannabis sativa69.3367.8383.97312forward
CNT3022780Pisum sativumPopulus trichocarpa23.7843.3285.05107forward

Expression of CNT30196655

Peptides detected in this lncRNA

>peptide 1 (80 aa)
MNCTKVSIFKQTNQVSFSCFLKCRNGTALESEICFEILSDFPNQSLERKLPYEKFGALLILPNLSQSNSSWTESVRLLHTS

Sequence

>CNT30196655
AAACAAAATCAGATTCTTTATAGCGGTGGAAAATTAAGAGCAATAGTCAAATTCATTCAACTTTTAAAGATTTAGGCACATGATTAACAATCGAATTCAA
AGGATTCAAACAACTAAACCCTAACAGAGCAACACAATCTAAGCCCTCTCTCCTCTGATTCTGCGAGCAAGTTGAATATCCTTAGGCATGATGGTGACTC
TCTTAGCATGAATTGCACAAAGGTTAGTATCTTCAAACAAACCAACCAGGTAAGCTTCAGCTGCTTCTTGAAGTGCAGAAACGGCACTGCTTTGGAATCT
GAGATCTGTTTTGAAATCCTGAGCGATTTCCCTAACCAATCTTTGGAACGGAAGCTTCCTTATGAGAAGTTCGGTGCTCTTCTGATACTTCCTAATCTCT
CTCAAAGCAACAGTTCCTGGACGGAATCTGTGAGGCTTCTTCACACCTCC