Detailed information on CNT30196405


BLAST search results

BLAST vs Swiss-Prot:
sp|P06353|H33_HORVU, E-value = 6e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30144042Pisum sativumMedicago truncatula45.955.3982.35119reverse complement
CNT3058538Pisum sativumAmborella trichopoda40.939.8286.79106forward

Expression of CNT30196405

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MNCTKVSIFKQTNQVSFSCFLKCRNGTALESEICFEILSDFPNQSL

Sequence

>CNT30196405
CCTAATTATAAATCATCAAAATCTATGTAATATAAACCCTAACGATCTAATCTAAGCTCTCTCTCCTCTGATTCTGCGAGCAAGTTGGATATCCTTAGGC
ATAATAGTAACTCTCTTGGCATGAATTGCACAAAGGTTAGTATCTTCAAACAAACCAACCAGGTAAGCTTCAGCTGCTTCTTGAAGTGCAGAAACGGCAC
TGCTTTGGAATCTGAGATCTGTTTTGAAATCCTGAGCGATTTCCCTAACCAATCTTTGG