Detailed information on CNT30196012


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01288|CHS6_PEA, E-value = 4e-97

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30171603Pisum sativumTrifolium pratense43.8789.5687.5472forward
CNT30597791Pisum sativumFraxinus excelsior6.3222.7485.2968forward
CNT30606750Pisum sativumGossypium raimondii25.8436.9282.73278forward

Expression of CNT30196012

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLVQLREDDHQWHLHCREQLFVRSKPSQK*

>peptide 2 (42 aa)
MNNTHALDMFPYSLSTSLVAFIFSGFKPNFSSTWSRIAGPPG*

>peptide 3 (49 aa)
MAPSLSGAIVCAVQTISKIGFSISGRGSEPTISAAAPSPNNACPTRLSK*

>peptide 4 (39 aa)
MENNSFNGKSRSESEQHTPVKPLSGSLKSLLSRFLSHLV*

>peptide 5 (40 aa)
MSNPKDRVIIINVQWLECFNQCFINVLRNNPGNIFKKMKC*

>peptide 6 (36 aa)
GCENIYFKSITKAKIKDINDICILTWLIHIENCIYY*

>peptide 7 (37 aa)
MLVQLREDDHSMFNGWNASTSALLMFFETIPGTSLRR*

Sequence

>CNT30196012
GGGATGTGAAAATATTTATTTTAAATCAATAACAAAGGCTAAAATAAAAGATATTAACGATATATGTATTTTAACATGGTTGATACATATTGAAAATTGT
ATTTATTATTAAAAGAAAATTCAAGCAAGATTAAAGTAATAGAATGAAATAAACCAAGCAAGCATCTCAAATAGCCACGCTATGGAGAACAACAGTTTCA
ATGGTAAGTCCAGGTCCGAATCCGAACAACACACCCCAGTCAAGCCCCTCTCCGGTAGTCTTAAGTCCTTGTTGAGCCGATTTCTTTCTCATCTCGTCTA
AGATGAACAATACACATGCACTTGACATGTTTCCGTATTCACTAAGTACTTCCCTTGTGGCTTTCATCTTTTCAGGTTTTAAGCCTAACTTTTCCTCAAC
TTGGTCTAGAATTGCAGGTCCACCGGGATGAGCAATCCAAAAGATCGAGTTATAATCATCAATGTTCAATGGTTGGAATGCTTCAACCAGTGCTTTATTA
ATGTTCTTCGAAACAATCCCGGGAACATCTTTAAGAAGATGAAATGTTAGTCCAGCTTCGCGAAGATGACCATTCAATGTTCAATGGTTGGAATGCTTCA
ACCAGTGCTTTATTAATGTTCTTCGAAACAATCCCGGGAACATCTTTAAGAAGATGAAATGTTAGTCCAGCTTCGCGAAGATGACCATCAATGGCACCTT
CACTGTCGGGAGCAATTGTTTGTGCGGTCCAAACCATCTCAAAAATAGGTTTTTCAATTTCAGGTAGAGGGTCAGAACCAACAATAAGTGCAGCAGCTCC
ATCTCCGAATAATGCTTGTCCAACAAGACTGTCCAAGTGAGTGTCACTAGGGCCACGGAATGTAACCGCGGTGACTTCAGAACAAACAACCAACACACGA
GCGCCTTTGTTGTTCTCAGCCAAGTCCTTAGCCAAACGAAGCACCGTCCCACCGGCAAAACACCCTTGTTGGTACATCATGTACCTCTTCACATATGGAC
GAAGACCTAACAGTTGGTGAGTTGGTAATCGGCTCCGGGCATATCTACACCACTTGTGGTGCAAAAGATCAAGTGA