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Detailed information on CNT30195771


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01287|CHS2_PEA, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628726Pisum sativumVigna unguiculata60.3782.4282.54905forward
CNT30705527Pisum sativumPrunus avium12.4740.3984.49187forward

Expression of CNT30195771

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MSCLASKEGAMYSQRLGFSFKISSVNTYISS*

>peptide 2 (49 aa)
MAPSLSGAIVCAVHTISNIGFSISGTGSEPTISAAAPSPNNACPTRLSK*

Sequence

>CNT30195771
AATATATATAGCTCGTGTAAACCAAAAGTATATATTATTTTAATAAATAGCAAATGAAATGCTGGTCATAATTATATTATTTTAATAAGATGGTACATGT
TGAATTCTAAACAATTTTCTCATGCTTACATAAAAAAAAATCAAGAAAAACATGAAAATAAATATAATTAAGAATTTCATATAGCCACACTGCGTAGAAC
AACGGTCTCAATGGTAAGTCCAGGTCCAAAACCGAATAGTACACCCCATTCAAGTCCTTCTCCTGTTGTGTTCAAACCATCTTGAGTTGATTTCTTTCTC
ATTTCATCTAAGATAAACAATACACAAGCACTTGACATATTTCCATACTCACTAAGTACTTCCCTAGTGGCCCTCATCTTTTCAGGCTTCAAGGCTAGCT
TTTGTTCCACTTGATCTAGAATTGCAGGTCCACCTGGGTGTGCAATCCAAAAGATAGAGTTGTAATCAGAAATTCCCAATGGTTTAAAAGCCTCAACCAA
TGCTTTATCGATGTTCTTAGAAACAATCCCAGGAACATCTTTAAGAAGGTGAAAAGTTAACCCCGCTTCTCGAAGGTGACCGTCAATGGCTCCTTCACTA
TCAGGTGCAATTGTTTGTGCAGTCCATACCATTTCAAATATAGGTTTCTCAATTTCTGGTACTGGATCAGAACCAACAATAAGTGCAGCTGCTCCATCTC
CGAATAATGCTTGTCCAACAAGACTGTCCAAGTGAGTGTCACTCGGGCCACGGAATGTGACCGCGGTAACTTCAGAACAGACTACTAGCACACGAGCATT
TTTGTTGTTCTCGGCCAAATCCTTAGCCAAACGAAGCACCGTCCCACCGGCAAAACACCCTTGTTGGTACATCATGTATCTCTTCACATATGGGCGAAGA
CCTAAGAGTTTGGTGAGTTGGTAATCGGCTCCGGGCATGTCTACACCACTTGTGGTGCAAAAGATCAAGTGAGTAATCTTGGATTTTGGTTGCCCCCATT
CTTTTATAGCTTTCACCGCAGCCTCTTTCCCTAGTCTAGGTACCTCGACGACCACCATGTCTTGCCTAGCATCCAAGGAAGGTGCCATGTATTCACAAAG
ACTAGGATTCTCTTTCAAAATCTCTTCTGTCAATACATATATCTCCTCTTAATCATAGATTTATCACCTGAAATAGTTATAAAGAAATGACATATCAGTA
CAACCATTTTTTAGAAACAACATAATAACAGATTTATCAAAAAAGTAATACTTACACATGCGTTGGAATTTCTCCTTGAGTACGGTTTTGTGCTCACTGT
TAGTGATTCTAAAGTAGAAATCAGGATAAGTACTTTGTTCAACACGGTTTGATGGATTAGCAGTGCCAATGGCCAAGATAGTTGCAGGACCTTCTGCTCT
TTGAGCCTTGCGAATTTCAGACACACTAACCATCTTGATATGTTTAGTAGTTTGTAATTAAAGAGTATATGATAAATATGTTAGGGAAGAGAGGGTTTT