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Detailed information on CNT30195656


BLAST search results

BLAST vs Swiss-Prot:
sp|O23884|CHS5_PEA, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524897Pisum sativumPhaseolus vulgaris46.1785.3484.54524forward
CNT30628733Pisum sativumVigna unguiculata65.4655.4584.79743forward
CNT30564019Pisum sativumActinidia chinensis14.7122.5481.44167forward
CNT30171320Pisum sativumTrifolium pratense36.6597.290.87416forward
CNT3022840Pisum sativumPopulus trichocarpa36.7442.8180.58417forward
CNT30114123Pisum sativumFicus carica36.6525.8981.01416forward

Expression of CNT30195656

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MAPSLSGAIVCAVQTISNIGFSISGIGSEPTMSAAAPSPNSACPTRLSK*

>peptide 2 (44 aa)
MSCLASNEGAMYSQTLGFSFKISSVRYIYLLLIMDLSPEVVIKK*

>peptide 3 (29 aa)
MLVPLHEGVHLWLLHYQEQSFVQSKPSQI*

Sequence

>CNT30195656
ATTCACTAAGCACTTCTCTAGTGGCCTTCATCTTTTCAGGCTTCAAAGCTAACTTTTGCTCTACTTGATCGAGAATTGCAGGTCCACCAGGGTGTGCAAT
CCAAAAGATTGAGTTGTAATCAGAAATTCCCAATGGTTGAAAAGCCTCAACTAATGCTTTATCAATGTTCTTTGATACAATTGCAGGAACATCTTTAAGA
AGGTGAAATGTTAGTCCCGCTTCACGAAGGTGTCCATCTATGGCTCCTTCACTATCAGGAGCAATCGTTTGTGCAGTCCAAACCATCTCAAATATAGGTT
TTTCAATTTCTGGTATTGGATCAGAACCAACAATGAGTGCAGCAGCTCCGTCTCCAAATAGTGCTTGTCCAACAAGACTGTCCAAGTGAGTATCGCTTGG
GCCACGGAACGTGACTGCAGTGACTTCAGAACAAACAACTAACACACGAGCACCTTTGTTGTTCTCAGCCAAGTCCTTGGCCAAACGAAGCACCGTACCA
CCTGCAAAGCAACCTTGTTGGTACATCATATACCTTTTCACATATGGGCGAAGACCTAACAATTTGGTGAGTTGATAATCAGCTCCAGGCATGTCTACAC
CACTTGTAGTGCAAAAGATTAAGTGAGTAATCTTTGACTTTGGTTGGCCCCATTCTTTTATAGCTTTGACAGCAGCTTCTTTCCCTAGTCTAGGTACCTC
TACCACCACCATGTCTTGCCTCGCATCCAATGAAGGTGCCATGTATTCACAAACACTAGGATTTTCTTTCAAAATCTCTTCTGTTAGATACATATATCTC
CTATTGATCATGGATTTATCGCCTGAAGTAGTTATAAAGAAATAATATTAGTTAGTACAATAATTTTTAGGTAAGTACCAAAACCAATAACACAGAAATG
AATACTTACACATGCGTTGGAATTTTTGTTTGAGTTCGGTTTTGTGCTCACTGTTTGTGATTCTAAAGTAGAAATCAGGATATGTAGATTGTTCAACACA
GTTAGCTGGATTGGCAGTGCCAATGGCCAAGATAGTTGCAGGACCTTCTGCCCTTTGAGCCTTGCGGATTTCAGATACACTGACCATGTTGATCTTGATG
TGCAGAAGTAGTTGTAGAAAAGGAATAAGATGAAG