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Detailed information on CNT30195450


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01287|CHS2_PEA, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3096581Pisum sativumSolanum tuberosum35.8822.3880.38418forward
CNT30143557Pisum sativumMedicago truncatula84.8994.4690.29989forward

Expression of CNT30195450

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MAPSLSGAIVCAVHTISNIGFSISGTGSEPTISAAAPSPNSACPTRLSK*

>peptide 2 (35 aa)
MSCLASKEGAMYSQRLGFSFKISSVKYIYLLLIIDL

Sequence

>CNT30195450
AATATATATAGCTCGTGTAAACCAAAAGTATATATTATTTTAATAAATAGCAAATGAAATGCTGGTCATAATTATATTATTTTAATAAGATGGTACATGT
TGAATTCTAAACAATTTTCTCATGCTTACATAAAAAAAAATCAAGAAAAACATGAAAATAAATATAATTAAGAATTTCATATAGCCACACTGCGTAGAAC
AACGGTCTCAATGGTAAGTCCAGGTCCAAAACCGAATAGTACACCCCATTCAAGTCCTTCTCCTGTTGTGTTCAAACCATCTTGAGTTGATTTCTTTCTC
ATTTCATCTAAGATAAACAATACACAAGCACTTGACATATTTCCATACTCACTAAGTACTTCCCTAGTGGCCCTCATCTTTTCAGGCTTCAAGGCTAGCT
TTTGTTCCACTTGATCTAGAATTGCAGGTCCACCTGGGTGTGCAATCCAAAAGATAGAGTTGTAATCAGAAATTCCCAATGGTTTAAAAGCCTCAACCAA
TGCTTTATCGATGTTCTTAGAAACAATCCCAGGAACATCTTTAAGAAGGTGAAAAGTTAACCCCGCTTCTCGAAGGTGACCGTCAATGGCTCCTTCACTA
TCAGGTGCAATTGTTTGTGCAGTCCATACCATTTCAAATATAGGTTTCTCAATTTCTGGTACTGGGTCAGAACCAACAATAAGTGCAGCAGCTCCATCTC
CGAATAGTGCTTGTCCAACAAGACTGTCCAAGTGAGTATCGCTTGGACCACGGAATGTAACTGCAGTCACTTCAGAACAAACAACCAACACACGAGCGCC
TTTGTTGTTCTCAGCCAAGTCCTTAGCCAAACGAAGCACCGTCCCACCTGCAAAGCATCCTTGTTGGTACATCATGTATCTCTTCACATATGGGCGAAGA
CCTAAGAGTTTGGTGAGTTGGTAATCGGCTCCGGGCATGTCTACACCACTTGTGGTGCAAAAGATCAAGTGAGTAATCTTGGATTTTGGTTGCCCCCATT
CTTTTATAGCCTTGACTGCAGCCTCCTTCCCTAGTCTAGGTACCTCGACGACCACCATGTCTTGCCTAGCATCCAAGGAAGGTGCCATGTATTCACAAAG
ACTAGGATTCTCTTTCAAAATCTCTTCTGTCAAGTACATATATCTTCTCTTAATCATAGATTTAT