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Detailed information on CNT30195402


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01287|CHS2_PEA, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3045136Pisum sativumPrunus dulcis25.559.8180.65372forward
CNT30156272Pisum sativumPistacia vera52.6449.8179.95768forward
CNT3087878Pisum sativumVigna radiata66.1461.7482.59965forward
CNT30647274Pisum sativumRosa chinensis44.9637.7278.2656forward
CNT30151821Pisum sativumPrunus persica25.564.5880.65372forward

Expression of CNT30195402

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MSCLASKEGAMYSQRLGFSFKISSVKYIYLLLIIDLSPEIVIKK*

>peptide 2 (49 aa)
MAPSLSGAIVCAVHTISNIGFSISGTGSEPTISAAAPSPNNACPTRLSK*

Sequence

>CNT30195402
AATATATATAGCTCGTGTAAACCAAAAGTATATATTATTTTAATAAATAGCAAATGAAATGCTGGTCATAATTATATTATTTTAATAAGATGGTACATGT
TGAATTCTAAACAATTTTCTCATGCTTACATAAAAAAAAATCAAGAAAAACATGAAAATAAATATAATTAAGAATTTCATATAGCCACACTGCGTAGAAC
AACGGTCTCAATGGTAAGTCCAGGTCCAAAACCGAATAGTACACCCCATTCAAGTCCTTCTCCTGTTGTGTTCAAACCATCTTGAGTTGATTTCTTTCTC
ATTTCATCTAAGATAAACAATACACAAGCACTTGACATATTTCCATACTCACTAAGTACTTCCCTAGTGGCCCTCATCTTTTCAGGCTTCAAGGCTAGCT
TTTGTTCCACTTGATCTAGAATTGCAGGTCCACCTGGGTGTGCAATCCAAAAGATAGAGTTGTAATCAGAAATTCCCAATGGTTTAAAAGCCTCAACCAA
TGCTTTATCGATGTTCTTAGAAACAATCCCAGGAACATCTTTAAGAAGGTGAAAAGTTAACCCCGCTTCTCGAAGGTGACCGTCAATGGCTCCTTCACTA
TCAGGTGCAATTGTTTGTGCAGTCCATACCATTTCAAATATAGGTTTCTCAATTTCTGGTACTGGATCAGAACCAACAATAAGTGCAGCTGCTCCATCTC
CGAATAATGCTTGTCCAACAAGACTGTCCAAGTGAGTGTCACTCGGGCCACGGAATGTGACCGCGGTAACTTCAGAACAGACTACTAGCACACGAGCATT
TTTGTTGTTCTCGGCCAAATCCTTAGCCAAACGAAGCACCGTCCCACCGGCAAAACACCCTTGTTGGTACATCATGTATCTCTTCACATATGGGCGAAGA
CCTAAGAGTTTGGTGAGTTGGTAATCGGCTCCGGGCATGTCTACACCACTTGTGGTGCAAAAGATCAAGTGAGTAATCTTGGATTTTGGTTGCCCCCATT
CTTTTATAGCTTTCACCGCAGCCTCTTTCCCTAGTCTAGGTACCTCGACGACCACCATGTCTTGCCTAGCATCCAAGGAAGGTGCCATGTATTCACAAAG
ACTAGGATTCTCTTTCAAAATCTCTTCTGTCAAGTACATATATCTCCTCTTAATCATAGATTTATCACCTGAAATAGTTATAAAGAAATGACATATCAGT
ACAACCATTTTTTAGAAACAACATAATAACAGATTTATCAAAAAAGTAATACTTACACATGCGTTGGAATTTCTCCTTGAGTACGGTTTTGTGCTCACTG
TTAGTGATTCTAAAGTAGAAATCAGGATAAGTACTTTGTTCAACACGGTTTGATGGATTAGCAGTGCCAATGGCCAAGATAGTTGCAGGACCTTCTGCTC
TTTGAGCCTTGCGAATTTCAGACACACTAACCATCTTGATATGTTTAGTAGTTTGTAAT