CANTATAdb - search

Detailed information on CNT30195395

BLAST search results

BLAST vs Swiss-Prot:
sp|P51079|CHS6_MEDSA, E-value = 4e-84

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30524952	Pisum sativum	Phaseolus vulgaris	54.3	58.85	85.22	379	forward

Expression of CNT30195395

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MLVPLHEGAIDGHLREAGLTFTFLKMFLQLSQRTLIKH*

Sequence

>CNT30195395
TGCTATTAAAGGTCCACAGATTTGTAACGCTTTCTTAAGAAAACACTATAGACTTCATTCCCTAAATATGTTGACATAATTTATTTATATTTTATTATTT
TAATATGATATTACAGAGTTGAATTTTGGATGATTTTCCATCCTAACATAAAAATCAAGCAAATTTGAATGCATACATAAAAATAAAATAATTAAGCATC
TCATATAGCCACACTATGCAAAACAACGGTTTCAATGGTAAGTCCGGGTCCGAAGCCAAATAGCACACCCCATTCAAGTCCTTCTCCTGTTGTCTTCAGT
CCATTTTGAATCGATTTCCTTCTCATTTCATCTAAGATAAACAAAACACATGCACTTGACATATTTCCATATTCACTAAGCACTTCTCTAGTGGCCTTCA
TCTTTTCAGGCTTCAAAGCTAACTTTTGCTCTACTTGATCGAGAATTGCAGGTCCACCAGGGTGTGCAATCCAAAAGATTGAGTTGTAATCAGAAATTCC
CAATGGTTGAAAAGCCTCAACTAATGCTTTATCAATGTTCTTTGAGACAATTGCAGGAACATCTTTAAGAAGGTGAAATGTTAGTCCCGCTTCACGAAGG
AGCCATAGATGGACACCTTCGTGAAGCGGGACTAACATTCACCTTCTTAAAGATGTTCCTGCAATTGTCTCAAAGAACATTGATAAAGCATTAGTTGA