Detailed information on CNT30195350


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632341Pisum sativumVigna unguiculata99.5299.1496.83348forward
CNT30312195Pisum sativumCamelina sativa50.868.5292.741709reverse complement

Expression of CNT30195350

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MGAGDVSRSDVERFVPVRQSTRDIDRRGL*

>peptide 2 (33 aa)
MRIDRPRRSNCSLEKRPQRRTGPKSPGRGRRRG*

>peptide 3 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGGISGERRPC*

>peptide 4 (30 aa)
MCASQRASKPVRRKEADWWDPLVGCTADRP*

>peptide 5 (33 aa)
MCLGRMWNGLCRSANRLETLTDADCDGGPSLGC*

>peptide 6 (40 aa)
MNRKLGYGAQLRANLDPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 7 (39 aa)
MRPQVRRGYPLNLSISISGGKETNKDSLSNGERTGISPP*

>peptide 8 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWRNQRGKKTLLSLTLVRLCEMT*

>peptide 9 (40 aa)
MQPQSGGKFRPRLNIGERPIANKYREGKMKRTLKRESKSA*

>peptide 10 (87 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGSQFRTRRLLVDCLSCSRGESGSPRAGRGTDWERAFRGLFPGHRTVNSELVRTRGIRLFN*

>peptide 11 (66 aa)
MVAQAWVVEMLAETSSSRLWTAARADSACFGTCALLASACGLPIRPVLKHGPRSLTCVRVNGRVNP*

Sequence

>CNT30195350
TTCTAAACGCTCGTGATGAGACCTCAGGTCAGGCGGGGCTACCCGCTGAATTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTA
GTAACGGCGAGCGAACCGGGATAAGCCCACCATGAGAATCGATCGCCCTCGGCGTTCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCCC
AAGTCCCCTGGAAGGGGGCGCCGGAGAGGGTGAGAGCCCCGTTGTGCTCGGACCCTGTCGCACCACGAGGCGCTGTCGGCGAGTCGGGTTGTTTGGGAAT
GCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAA
AGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGTGTCTCGGTCGGATGTGGAACGGTTTGTGCCGGTCCGCCAATC
GACTCGAGACATTGACCGACGCGGATTGTGATGGTGGCCCAAGCCTGGGTTGTTGAAATGCTCGCGGAGACGTCATCATCACGATTGTGGACGGCAGCGC
GCGCTGATTCGGCGTGCTTCGGCACTTGCGCGCTCCTGGCGTCGGCCTGTGGGCTCCCCATTCGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATG
TGTGCGAGTCAACGGGCGAGTAAACCCGTAAGGCGCAAGGAAGCTGATTGGTGGGATCCTCTTGTGGGTTGCACCGCCGACCGACCCTGATCTTTTGTGA
AGGGTTCGAGTGAGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGAT
ACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTG
GAGCCCGAGGGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGTG
TGGCTGCTCTGTTGAGCCATGCCATGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCTGGGTTAC
GGTGCCCAACTGCGCGCTAACCTAGACCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGT
AACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTAAAGCGCGCGACCTATACCCGGCCGTTGGGGCAAGGGCCAAGCCCTGATGAGTA
GGAGGGCGCGGCGGTCGCTGCAAAACCCAGGGCGCGAGCCTGGGCGGAGCGGTCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACT
TTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGGGACGGGGGAAGCCCGTCTGATAGCGCTCTAAGC
GCGTACACCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGTGGCTGACGGCAACGTTAGGGAGTCCGGAGACGTTGGCGGGGGCCCCGGAAA
GAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCC
GGTGCGCCCCTGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCTTCCATGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTG
GTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTTCCGA
ACCCGTCGGCTGTTGGTGGACTGCTTGAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGTCGGGGGACGGATTGGGAACGGGCCTTTCGGGGCC
TCTTCCCCGGGCATCGAACAGTCAACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGTT
GACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAG
CCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGG
GCTTGGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTGGAAA
CAGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAGGCGGGGCGCTGCCCCTCTTTTTGGATCCAAGGCTGACTTTGG
TTGGTCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAG
AACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGAC
CTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGA
TGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAG
GTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAA
GCCAGTGGCGCGAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGATGCGTGCGCCCGCCGTTCACTTGCCGA
CCAGCAGTAGGGGGCCTTGGCCCCCCAGAGGCACGTGCCGTTGGTGTACCCTGTAAGGTGGATGAGCCTTGCGGGACACTATGAAACGCAATTCCTATTG
AGCGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACAGGGTATTGTAAGTGGCAGAGT