Detailed information on CNT30195173


BLAST search results

BLAST vs Swiss-Prot:
sp|P42048|PSAF_CUCSA, E-value = 9e-09

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30716553Pisum sativumMalus domestica golden21.3210.3585.2968forward

Expression of CNT30195173

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MSATAGSGDEMRIEERASAAEKAFRFEFAWSV*

Sequence

>CNT30195173
CGCCAGCGCCGGAGCGCTGTCGGGAGCGTAAATCTTGAGGGAGGACTCGAGTTTTTTGATTGACTGTTTTTCGCGTTTGGCGAACTGTTTTGATTCTTTG
CATGGGGTTAAGCCGGAGATGTCGGCGACGGCCGGGAGTGGGGATGAGATGAGGATTGAGGAGAGGGCTAGTGCAGCGGAGAAGGCTTTTAGATTTGAGT
TTGCATGGTCGGTTTGATTGTTTGGGGTTTGGGTTGAGGTGGGTTTCGAGAGGTTAGTTGGAATGGTGAGAGACATTTTTTTGTGAGGAAAAAAGAATGG
TGTTTGTAATTGGGGTTTT