Detailed information on CNT30195107


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532211Pisum sativumEucalyptus grandis22.5815.0192.8698reverse complement
CNT30711602Pisum sativumGlycine max32.2651.6681.43140forward
CNT3085348Pisum sativumVigna radiata13.8224.1988.3360forward
CNT30239222Pisum sativumBrassica oleracea22.5817.3883.6798forward
CNT3058323Pisum sativumAmborella trichopoda23.2710.6888.12101forward

Expression of CNT30195107

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MLETSNSLGEIVSLSKKACFFFPPHEENIFFPLNKTLRNCSYRKS*

>peptide 2 (51 aa)
MFFFPAARRKYFLSTEQDIEELFIQKIIITGPFPIKRESFVTIEREVILINQ

>peptide 3 (33 aa)
QIFMQLLPFWIIEINSGKRLTRSSFKIHYFFLC*

Sequence

>CNT30195107
CCAAATATTTATGCAACTTCTTCCATTTTGGATCATAGAGATTAATAGCGGAAAGAGGTTGACAAGAAGTTCTTTCAAAATTCACTATTTCTTCCTCTGT
TAGAGGTGTTCCAGAAATGTCCGCGATCGAGTAAATAGCTCTAGGAACGCGAGTTGGAAAATGGAAAGACTTGTACAACTCATATCCGTCATCACCACTT
TGCGGAAAAGTATTTGCTATCAATATGTTAGAGACCTCTAACTCGCTTGGTGAAATAGTATCTCTGTCCAAAAAAGCATGTTTTTTTTTCCCGCCGCACG
AAGAAAATATTTTCTTTCCACTGAACAAGACATTGAGGAATTGTTCATACAGAAAATCATAATTACAGGACCTTTCCCCATAAAAAGAGAATCTTTTGTT
ACAATCGAAAGAGAAGTTATATTGATTAATCAAG