Detailed information on CNT30195089


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524663Pisum sativumSetaria italica11.835.2294.15205reverse complement
CNT30641718Pisum sativumNymphaea colorata12.0838.8297.62210reverse complement
CNT30157743Pisum sativumPistacia vera5.5220.1390.6296forward
CNT30185403Pisum sativumSecale cereale4.6631.495.0681reverse complement
CNT30511593Pisum sativumSolanum lycopersicum8.9823.9691.67156reverse complement
CNT30655402Pisum sativumRosa chinensis4.8324.7195.2484forward
CNT30720843Pisum sativumTriticum spelta4.4335.8190.9177reverse complement
CNT30497700Pisum sativumDigitaria exilis25.681.3583.82445forward
CNT30174498Pisum sativumVigna angularis20.670.8988.83358reverse complement
CNT30551087Pisum sativumOryza brachyantha9.0352.6892.99157forward
CNT30602362Pisum sativumGaldieria sulphuraria4.6629.7883.9581forward
CNT30115272Pisum sativumEutrema salsugineum10.0135.891.38174reverse complement

Expression of CNT30195089

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MLSAVIRSALGYPAFTVGTITGTPEVRPSRSSRTRERSSQCSNAHTGYGP

>peptide 2 (51 aa)
MPQLHTLLYFHLTPIVNEKRLVYRSVRMPQLHTLLYFHLTPIVNEKRLVSP*

>peptide 3 (30 aa)
LLANLFQFNNRSQYYALKRNRTSTLFSTRF*

>peptide 4 (29 aa)
MKSVKLFIILAPSYFSAGPPLQYRHRSRV*

>peptide 5 (29 aa)
MCRLLIFLCSTVWGYSIIYTIYKYSIYKK*

>peptide 6 (42 aa)
MKNGSSRRDLQFSNLLLLRPRRGRESALRGGSGEVGIGEHSS*

Sequence

>CNT30195089
CTGCTGGCGAACTTATTCCAATTCAATAATAGATCTCAATATTATGCCTTGAAGAGGAATCGAACCTCCACGCTGTTTAGCACGAGATTTTGAGTCTCGC
GTGTCTACCATTTCACCACCAAGGCATCAATCATATTCTATGAATATGATATCTATCTTATGGAATATATTACAAATATATAGTATAAGATATTATTAGA
TATCTTATTATATGATAATATAGATGGGATAGAATTTGCCGTTGTTCCCCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACCGATTGGTCGTAGGTTC
AAATCCTATTTGGGGAGATTTTATTCATTTCCAATTAAAGAATTTGGAATCAAAAGGAAGTGTAAAGTTTGTTTCTATTACATTCTATCTCATCGTATAC
TATTCTACTATATTGGGGACTCCCGGTCAATACCTATGTGTAGATTATTGATATTCCTTTGTTCTACAGTCTGGGGCTATTCTATTATTTATACTATATA
TAAATATAGTATTTATAAGAAATAAAAAATGTAAGACTATTTTGTTTCAACCTCAATCATAGTTTATTTTCTTATCCCCAAGGTCCTTCCCCTTTTAGCC
GGTTGTGGGCGAGGAGGGATTCGAACCCCCGACACCGTGGTTCGTAGCCACGTGCTCTAATCCTCTGAGCTACAGGCCCCACCCTGTCTCCACTAGATCT
GTTCCCCGGAGTACCCTATAAGAAACATTTACTCTTCCCAGCTATATTTTGATTAAGAAGATGTGAAAGCGACTCTCTCCTTATAAGAATACAAATAGAA
TAAGGATTGTGCGTTCCGAGGTGTGAAGTGGGATAGATTTGATAATTGGGGTTTAGAATAAGACGACCTTTTCATTCTGATTTTCTTTTGCTATTGAAAA
AGAGAATAAGAATGAAAAGTGTTAAGCTTTTTATCATCCTGGCGCCGAGCTATTTTTCCGCAGGGCCTCCCCTACAGTATCGTCACCGCAGTAGAGTTTA
ACCACCAAGTTCGGGATGGATTGGTGTGGTTCCTCTACGCCAAGGACACCAGAATATCGAACCATAAACGAAAGAAAGACATGAGATAAAAATATATTTA
CTTTTCATTGTGAGTGTGAGGTCCTAATTCTTGACTGGAGAGGACACCAAAGGCCTCCGCCCTTCCATCCCTATCTATTAAAGGGGTGGGGACAGAGGTT
TTGGTTTTTTCATGTTGTCAAAGAGGTGAACAATAAAAATAGATGGCGAGTGCCTGATCGAATTGACCAGGTCATGTAGGAACAAGGTTCAAGTCTATCG
GTCTGTTAGGATGCCTCAGCTGCATACATTACTGTACTTCCACTTGACACCTATCGTTAATGAAAAACGGCTCGTCTATCGGTCTGTTAGGATGCCTCAG
CTGCATACATTACTGTACTTCCACTTGACACCTATCGTTAATGAAAAACGGCTCGTCTCGCCGTGACCTTCAATTCTCAAACCTTCTTTTGCTCCGTCCC
CGTAGGGGCAGAGAATCTGCCCTCCGGGGAGGCTCTGGGGAAGTTGGAATAGGAGAGCACTCATCTTAGGGTGGGCTTACTACTTAGATGCTTTCAGCAG
TTATCCGCTCTGCACTTGGCTACCCAGCGTTTACCGTTGGCACGATAACTGGCACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTC
CTCTCAATGCTCTAACGCCCACACCGGATATGGACCGA