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Detailed information on CNT30195076


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0G9G1|TI214_LIRTU, E-value = 1e-96

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30502432Pisum sativumNicotiana attenuata13.9223.182.84204forward
CNT30625292Pisum sativumDaucus carota14.3229.2580.95210forward

Expression of CNT30195076

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MDMKIIRRPVINPVVAAISVSDPSFSITRARISKT*

>peptide 2 (87 aa)
MIFYISQRPTPSIIIEKSRYKRFFQRGQFFIFVNIYVVGSRLFFLILRKLNSNIFLVSFVRIYCSLDFLLPVFVVVSHFGTIIIRGR*

Sequence

>CNT30195076
TGTTTCTGAAAAGTAGATAAATGAGGTGGATACGTGAAAGATATTCGTTTTTTTCCATCACTTTCGCATGTTTGAAAGAAAAATTGTGAATTTTCATCTT
TTTCAATCCTGTTAAACTTATGATTTTCTATATATCGCAAAGGCCTACTCCATCGATTATAATCGAAAAGAGTCGTTACAAGAGATTTTTCCAACGGGGC
CAGTTTTTTATTTTTGTCAATATTTATGTTGTTGGAAGTCGTCTCTTTTTTCTCATTCTGAGAAAGTTAAACAGTAATATCTTCTTGGTTAGTTTCGTCC
GGATCTATTGCAGCTTGGATTTCCTCCTCCCGGTTTTCGTCGTAGTCTCCCATTTCGGCACCATAATAATACGGGGACGGTGAGTTGCCTAAATAGAGCG
CAAAGAAGAAAAATGCAAAAGCTCCAAACATTTGCGCCGTATAATTTCGCAATTGTAGGAGAGTGTATTTATCAAATCTCATAGTTATCTTAGATTTGAT
CGAATTTTTTTGCTTTAACCCGACTAACACCAATCCAATACATTTCATCAAAAAGATGTGACCAATTAACCACCCAACAAAACTACTTATTAAGAAGAAC
AATTTATTGTTGGATCGAAACAGATAAATGTTCATTACTCTTAGTACGATTGAACTTTTCATCAAAAAGATGTGACCAATTAACCACCCAACAAAACTAC
TTATTAAGAAGAACAATTTATTGTTGGATCGAAACAGATAAATGTTCATTACTCTTAGTACGATTGAACTTGGAACAACAACGTGATAAAACAGTTGAAA
CAAAAGATTATTGAAGAATACTTTGTAAATCCTCAAATTACGTATTGAGTTTGGATTCTTGTATCCAGAATCCACCAAAACCGGATCCTTGTATCCAGAA
GACAGGTCGGATACCCAAGCCGACCGATAGAAATGATTGTCATTGTGGTATAGAAAATAAAAGAAAAGATAAGGTACTAGTAAGAATGATACCGTATGAG
GTCTATTCAATGCCAAATGTAAAGGCGTATAATAGATGGATATGAAGATCATCAGGCGTCCCGTAATAAACCCAGTTGTTGCTGCTATTTCCGTCTCGGA
CCCTTCTTTTTCCATAACCCGGGCTCGAATAAGCAAGACATAAGACGGACCTATGGCGATTGTAGTCAGAAATCCATAATAGAGTCCGATCACAACGGCT
GAATTCAGTATTTGAAGGCAGAAACCTCTAAAAGAATCTCGTACAAAATACTTGCAAATCATATGCTAAACATTTTTTTTTAATTCTTTTTTTTTTTTCT
TTGGTATGAAGTTGTAATTATTCCCGGTAGGAACCGGTAGGAAGTTTGAATTATTCTCTCCTATTATCCTATTATTCTATTATCCTATTATAACTTATTA
TAATAAATCATTTGATTTTTCGCAAGTTTTCATTATTCTCTGCTATTATCCTATTATACTTTTATA