Detailed information on CNT30194705


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533222Pisum sativumEucalyptus grandis14.132496.1578forward
CNT30191267Pisum sativumSecale cereale14.4923.5393.7580forward
CNT30144286Pisum sativumMedicago truncatula13.4120.8598.6574reverse complement
CNT3078045Pisum sativumBrassica juncea14.3121.0193.6779forward
CNT3067939Pisum sativumLeersia perrieri12.1423.2697.0167reverse complement

Expression of CNT30194705

Peptides detected in this lncRNA

>peptide 1 (63 aa)
KRSTINTQTRVFISQIHSYSAAENRHRSKELQRVTFITKHESEVEEEAHEEVEEEAPKDETEI*

>peptide 2 (38 aa)
METFPSCLIPALGHLIPIWFNDLEVWLAGRFSIDIDKT*

>peptide 3 (31 aa)
MFLWLILAHNLIFLFVPQIAFNHYVTLNHDF*

Sequence

>CNT30194705
CGAAACGCAGCACTATAAATACCCAAACGAGGGTTTTCATTTCTCAGATTCATTCATATTCTGCTGCTGAAAATCGCCATCGTTCAAAGGAGCTTCAAAG
AGTAACGTTCATCACCAAACATGAGAGCGAAGTGGAAGAAGAAGCGCATGAGGAGGTTGAAGAGGAAGCGCCGAAAGATGAGACAGAGATCTAAGTAGGT
GCATCAGATGGAGACCTTTCCATCCTGCTTAATACCTGCTTTGGGTCATCTTATCCCGATCTGGTTTAATGATCTTGAAGTTTGGTTGGCAGGAAGATTC
TCTATAGATATAGATAAAACTTAGCTGTATTGTTCTAAGTCAATTTATTTTGAGTGTTTTGTGGTACTAATGCGAGTACTGGTTTTGTTTGGTATAATGA
CTGATATGTTTATTTATGTTCTTATGGCTGATATTAGCGCATAATTTGATCTTTTTATTTGTGCCTCAAATTGCCTTTAATCATTATGTCACGTTAAATC
ATGATTTCTGATAGCCTATTTGGCGAATGTGACTCAAAACCTTTGCTTTGCC