Detailed information on CNT30194604


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FM19|HIR1_ARATH, E-value = 8e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693652Pisum sativumOryza sativa63.1768.1278.72235forward
CNT30675691Pisum sativumSetaria viridis36.8327.7380.29137forward
CNT30531529Pisum sativumEucalyptus grandis27.9629.5582.69104forward
CNT30401917Pisum sativumBeta vulgaris62.3755.980.17232forward
CNT30709031Pisum sativumGlycine max29.8410.6782.88111forward
CNT30145478Pisum sativumMedicago truncatula29.8426.0684.68111forward
CNT3075659Pisum sativumBrassica juncea23.9224.6587.6489forward
CNT30262753Pisum sativumBrassica rapa65.0527.9181.82242forward
CNT30471513Pisum sativumSaccharum spontaneum27.1524.5182.18101forward
CNT30352560Pisum sativumEragrostis tef30.6520.7784.21114forward
CNT30101718Pisum sativumOryza rufipogon63.1740.878.72235forward

Expression of CNT30194604

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MFRVRSQRTEEHCPSVHPRWLDVDELYRVLIGTWTPLLLQLS*

>peptide 2 (37 aa)
EDLQKHLYVCSISLKETIPYLHSNVSNSTRTMWYEHR*

>peptide 3 (29 aa)
MSLTAPGPCGMNTDEDFDDAPISFMVSKY*

Sequence

>CNT30194604
GGAAGATCTTCAAAAGCACTTATATGTTTGCAGCATTTCCCTGAAGGAGACCATCCCTTATCTGCACAGCAATGTCTCTAACAGCACCAGGACCATGTGG
TATGAACACAGATGAAGATTTCGACGACGCTCCAATTTCCTTCATGGTGTCAAAGTATTGAGTTACCAGCACCATGTCCATGACATCTTTAGCCGATGTT
CCGGGTACGTTCTCAGAGAACTGAAGAACACTGTCCCTCAGTCCATCCACGATGGCTTGACGTTGACGAGCTATACCGAGTCCTGATAGGTACTTGGACT
CCGCTTCTCCTTCAGCTTTCTTGATCTGCAGTATCTTTTCTGCTTCGGCTTTCTCGTTTGCAGCCAACCTCA