Detailed information on CNT30194511


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30308821Secale cerealeTriticum aestivum96.4491.494.141434forward
CNT30665732Secale cerealeTriticum dicoccoides86.2878.5295.561283forward

Expression of CNT30194511

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MPAEGSSRSVLAVRRTGRPGPRSNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR*

>peptide 2 (55 aa)
MRPSQKSGFVARISSRITTVIRVARTIKQTITDLMSHSQFHSSNWFILAHAWLNL*

>peptide 3 (96 aa)
MRQRRKRYLAATAHPMGVRREATNIRSTTSRRPGNSTQALLIQRFEATRLTGHGAGSRPQYNGGSTGRHGSKAAHALSSQQAVKPTKPPPMQSMGE*

>peptide 4 (71 aa)
MRLVANKRSNQRSLRPCRAWENNSHEGVLQGHVTRVTPTTIKLRVKRFSKGEIRGDVGATLSAGLIMHVTG*

>peptide 5 (41 aa)
MRPVLLFIVTTSPCQDWVICAPAAFLGCGSRFSGSLSGIEP*

Sequence

>CNT30194511
CGATGCCGGCTGAAGGGTCGAGTAGGTCGGTGCTCGCCGTGAGGCGGACCGGCCGACCCGGCCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTT
AAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATT
ACCAGACACTAATGCGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG
CCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAG
AAATTTGAATGATGCGTCGCCGGCACGATGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGGATCAGCGAGCAGAGCCCGCGTTAGCCTTTTATCTA
ATAAATGCGCCCCTCCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCACGTACCATCAAACAAACTATAACT
GATTTAATGAGCCATTCGCAGTTTCACAGTTCAAATTGGTTCATACTTGCACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATCA
ACCAGGTAGCACGTCCTCGGTGACGCCCAGCGTCGGCCGTCTCCCTGCTCTTCCACTTGCGTGGAAACTCATAGGAAACAGCCGGACCGGTTGTCGCTTT
TGAGCGGCATAGCTCATCGTCCATGAGGATCGGCGCAGAGAGTCGCGTATCCTACCACGTAACTGTGGAGAGGTAGAGGCAACTCTTGTTCCGGTTGTTC
TCAGTTCGAAGAGCTTTTGGTCGGGTCGAGGCAACCAAAAGGGCCACGACTCTTTATCGTGAGCAGCATCCGATACCAACAGCGGGAGCGAGGTTGCCTT
GATAGCACCAGGCACGTACGTGCCGGCGCCATGAGGCAACGCCGCAAGCGCTATTTGGCCGCAACGGCACACCCAATGGGCGTCCGCCGCGAGGCAACAA
ATATAAGAAGCACCACTTCCCGTAGGCCGGGTAATAGCACGCAAGCACTCTTAATCCAGCGATTCGAAGCCACACGATTGACGGGACACGGCGCCGGTAG
TCGGCCGCAGTACAACGGGGGATCTACCGGCAGACACGGGTCCAAAGCTGCTCATGCGCTTAGTAGCCAACAAGCGGTCAAACCAACGAAGCCTCCGCCC
ATGCAGAGCATGGGAGAATAACTCACATGAAGGCGTCCTGCAAGGCCACGTCACACGTGTCACACCCACAACAATAAAATTACGGGTGAAACGATTTTCC
AAAGGCGAAATTAGGGGGGACGTCGGTGCAACGTTGTCCGCAGGTCTTATCATGCACGTAACAGGCTAGTTTCCTGTATCCCGAGCC