Detailed information on CNT30194361


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000224, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30444212Secale cerealeAegilops tauschii69.7665.895.68856reverse complement

Expression of CNT30194361

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MITRRIARPSCRRRIIQISALSTFDGRIGAYHGGDG*

>peptide 2 (43 aa)
MAPARTCLVLSRQPRSRCWYRMLLTIKSRGPFGCLDPTKSSSN*

>peptide 3 (39 aa)
MSYAAQKRQPVWLFPMSFHASGRAGRWPTLGVTEDVLPG*

>peptide 4 (58 aa)
VDPPLYCGRLPAPCPVNRVASNRWIKSACVLLPGLREVVLRIFVASRRTPIGCAVAAK*

>peptide 5 (66 aa)
MDDELCRSKATTGLAVSYEFPRKWKSREMADAGRHRGRATWLILPVVICLSQRLSHACASMNQFEL*

Sequence

>CNT30194361
GTAGATCCCCCGTTGTACTGCGGCCGACTACCGGCGCCGTGTCCCGTCAATCGTGTGGCTTCGAATCGCTGGATTAAGAGTGCTTGCGTGCTATTACCCG
GCCTACGGGAAGTGGTGCTTCGTATATTTGTTGCCTCGCGGCGGACGCCCATTGGGTGTGCCGTTGCGGCCAAATAGCGCTTGCGGCGTTGCCTCATGGC
GCCGGCACGTACGTGCCTGGTGCTATCAAGGCAACCTCGCTCCCGCTGTTGGTATCGGATGCTGCTCACGATAAAGAGTCGTGGCCCTTTTGGTTGCCTC
GACCCGACCAAAAGCTCTTCGAACTGAGAACAACCGGAACAAGAGTTGCCTCTACCTCTCCACAGTTACGTGGTAGGATACGCGACTCTCTGCGCCGATC
CTCATGGACGATGAGCTATGCCGCTCAAAAGCGACAACCGGTCTGGCTGTTTCCTATGAGTTTCCACGCAAGTGGAAGAGCAGGGAGATGGCCGACGCTG
GGCGTCACCGAGGACGTGCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTATGAACCAATTTGAACT
GTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAAC
CCCGACTTCTGGGAGGGGCGCATTTATTAGATAAAAGGCTAACGCGGGCTCTGCTCGCTGATCCGATGATTCATGATAACTCGACGGATCGCACGGCCAT
CGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCG
ATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATA
ACAATACCGGGCGCATTAGTGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGG
TAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACCTTGGGCCGGGTCGGCCGGTCCGCCTCACGGCGAGCACCG
ACCTACTCGACCCTTCAGCCGGCATCG