Detailed information on CNT30194250


BLAST search results

BLAST vs Swiss-Prot:
sp|P80264|NDUS2_SOLTU, E-value = 1e-18

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675027Secale cerealeSetaria viridis35.25101.2996.71943forward
CNT30297416Secale cerealeTriticum aestivum51.6310099.351381forward
CNT30221243Secale cerealeHordeum vulgare47.6659.1698.591275forward
CNT30554880Secale cerealeOryza glaberrima9.6420.298.06258forward
CNT30681493Secale cerealeTriticum urartu62.5410099.581673forward
CNT30596463Secale cerealeOryza meridionalis15.33101.2397.32410forward
CNT30104344Secale cerealeOryza rufipogon25.3541.9896.61678forward

Expression of CNT30194250

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MLRMLRHGIDRFSSPSFPVHSLCISDTQGRTRWEESCPSLCPVDHSAGILHSRLRLTAARECSCRYVSLSGSLAPPLISFYDML*

>peptide 2 (30 aa)
MSSRMLRSGIRSEILDLPVPSRHGKEIRKK*

>peptide 3 (46 aa)
MALLCIGRTKPIANNKLFPAPSTLINSPILPSLSCQPIVSKHTAAN*

>peptide 4 (49 aa)
RNIDRVNDGTNNETLRQLFRTRSLASHTQVLSEPCNKVTHNTALPLELP*

>peptide 5 (77 aa)
MSRGELCYSPPAKVIAAVASVWKRVSFRQHLFQIGKDEYLCWVLQTRIASDQNLINVPGVDHIFWAISIQEFERLCS*

>peptide 6 (33 aa)
MSGAPSLGGAFVEPNRRKSKRARPHPASNRRGA*

>peptide 7 (69 aa)
MRTSFPFALPTLRSHGYQSGGRAGSRYHEPSVPHIYQEASVVHRFHRMLLSLGKDRVSVQLCFGCFAME*

>peptide 8 (66 aa)
MQSVSALDYSIPDRRIMAPRKHSIQQQHLLQPREDKTDVSYIRAFTAQRRSRTLPMIINPKERSTK*

Sequence

>CNT30194250
GTAGAAACATAGATAGGGTCAACGACGGAACGAACAACGAAACTTTACGACAGCTTTTTCGTACACGTTCACTTGCATCACATACACAAGTGCTCTCTGA
ACCGTGCAATAAGGTCACCCATAACACGGCTCTCCCACTGGAGTTACCTTAGCCCCGGGCCATGCTATTCCATGATATTGGAAAAAGTTGACTAATTATT
ATCATCGTCTTGAAAGCTGGGCGCCTTTTGAATATGAGTGGGGCTCCTAGTCTAGGCGGCGCCTTCGTGGAGCCAAACCGAAGGAAGAGCAAAAGGGCGA
GGCCACACCCGGCTTCGAATAGGAGGGGGGCTTAGCTCTGGATCCCGCCTGCTTGCAGAAATGAATGGATCAGAAAGGGGGCTGGGTTCTATTTCCGGGC
CGGGCAGGAGGTGAAGGCCAGAAGAAGAAGAGAAGTGCGCCTTCCCGGTAAGGAAGAGGATAAAAAGGTGCTGTCATCTATCTCGACCTGTTTCCCGAGG
CGTTGGAAATGAAGACCGGCTCAGAGAATCACTGGCGTGCTTTCTCTCCCCCATCGTTTCGCCAACAAAGAAGTCATCCTTGACTTGACTATTGACCATT
CCATCCCTACCGAGCCGCCTCTTCGAAGTATTTACCTCTGCCTTTCTTTTTTGAGAACATACCCTTCAAATCAAAAAGCAAAAAAGAAAGAAAAGTTCCT
CGTCTGTGATTTAATCGGCCCTAAGGGAGTTTACTCGACCCATTCTCCAGTCTCCCGCACTGCTCAAGTGTGCGACTCCGTATGAGGACCTCCTTCCCTT
TTGCTTTGCCCACTCTCCGTTCACACGGTTATCAAAGCGGAGGAAGGGCGGGCAGCAGGTACCACGAGCCCTCTGTCCCACACATCTATCAAGAAGCAAG
TGTAGTTCACCGGTTCCACCGAATGCTCCTATCTCTCGGCAAAGATCGTGTGAGTGTGCAGTTATGCTTCGGATGCTTCGCCATGGAATAGATCGATTCA
GTTCCCCTTCTTTTCCGGTGCACTCGCTTTGTATCTCCGACACACAAGGAAGGACGCGGTGGGAAGAAAGCTGCCCTAGCCTCTGTCCGGTCGATCATTC
CGCTGGCATCTTGCATTCACGCCTCCGTTTGACTGCCGCTCGGGAATGTAGTTGTAGATACGTGAGTCTTAGTGGGTCGTTGGCTCCACCTCTTATCTCC
TTCTACGACATGCTGTAGTCGTCGCCATATTCAATATGTCACTTAGTCATATCTGCCTCGCAGCGGGTCAGCACCTTCGAAAGAAAGGGAGGGAGGACTT
CATTCAGTGACTCCGCGATCGCCCTCTAAACGATCAAAATAAGGTAAAGCTTGAAGATAAGTTTTGTACTCGATTAATTTCTCAGTCCCTCTAGTCGGTG
ATCCAATATGTGGTTCCGCACGTTCCACCACTTCTCCGTTCATTTCCAATACTGATCGTGAAACACCATGAGCAGCAGGATGTTGAGGTCCGGAATTCGA
AGTGAAATTCTTGATTTGCCCGTTCCTAGTCGTCATGGGAAAGAAATAAGAAAGAAATAAGAAAGAGATTATTCCCCTAGAGCTTGTCCAGTACGACCAG
TACTCAAAATGCATCTCCGCGCGTCTACCTGGCGCTTTTATTAGCCGCCTTGCATGCAAGCGAAGCGCTATTGGCGGCAATTAATAGCTCACTGAGCGAT
GATTGATGCAGTCAGTCAGTGCCCTCGATTATTCTATTCCTGATAGAAGGATCATGGCGCCCCGGAAGCATTCCATCCAGCAGCAGCATCTCCTTCAACC
ACGCGAGGACAAAACTGATGTTAGCTACATTCGAGCGTTCACCGCACAGAGGCGATCTCGAACACTACCTATGATAATAAATCCAAAGGAAAGGTCGACA
AAATGATTCAATCTGACTTTATCGGTATTCTGGATTGAGTAAAAAAGGGATATATGAAGTTCAAGGCCTTGCCAAAACCGTCATGGCCCTATTATGTATA
GGCCGTACTAAGCCAATAGCGAATAACAAACTCTTTCCTGCTCCCTCGACCTTAATTAACTCCCCCATCCTGCCAAGCCTCAGCTGCCAGCCCATTGTAT
CTAAGCACACTGCGGCAAATTGATACAAGTAGCTAAAGATCTCGCATCCGACATCTCCGGCCGAACGGTTAGGCAACACTAGGGCGCCTGGGTCAAAATT
CCGCTTACCAAACAAGATGTCGAGAGGCGAACTCTGTTATTCCCCTCCTGCAAAAGTGATAGCGGCTGTAGCATCCGTGTGGAAGAGGGTAAGCTTTCGG
CAACACCTTTTTCAGATTGGAAAGGATGAATACTTGTGTTGGGTCCTGCAGACCAGGATAGCCTCAGATCAAAACCTAATAAATGTACCTGGGGTTGATC
ATATTTTTTGGGCAATAAGTATTCAGGAATTTGAGCGCTTATGTAGCTAAAAACTCTGCCACCTGAATACTTGATTCATTAAGGTCGTCACCCTATACCC
GGAAGTCTCTATCGTTTTCTTTGTCTGTTAAGCTTCACAGGGTTGGGACTCCCTAAATCAAACTGCAATCGTTGTTTATCAACCACTCACGACGACACCG
AGATCTTCGACTTAGCTCCCACAGGTCATCCACCCGGGGCGGAAGATAACGAAAGGGAGACAAAGTCCTAACCAA