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Detailed information on CNT30194117


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENT4|CYB6_SACOF, E-value = 3e-82

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378680Secale cerealeArabidopsis thaliana19.2920.8789.76254forward
CNT30139987Secale cerealeLolium perenne62.19101.7492.31819forward
CNT30230643Secale cerealeAnanas comosus43.9676.5989.64579forward
CNT30338816Secale cerealeEragrostis tef32.6560.5692.56430forward
CNT30369893Secale cerealeOryza glumipatula26.1276.9691.86344forward
CNT30108418Secale cerealeOryza longistaminata21.4961.9392.93283forward
CNT30104459Secale cerealeOryza rufipogon27.33100.2893.61360forward
CNT30575540Secale cerealeOryza barthii26.283.9490.72345reverse complement

Expression of CNT30194117

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MGRNIFTSYIICNCLNLKTFLKPIIYFIEIGN*

>peptide 2 (29 aa)
MKISSRTAQAETHKFSTNIRKKVQNFISH*

>peptide 3 (36 aa)
TPVTQVNSRGFLNPPVRYTRNTCRIIIKTIILADHR*

Sequence

>CNT30194117
CCACACCTGTGACCCAAGTTAATTCACGGGGTTTTTTAAATCCCCCTGTGAGATACACACGAAATACATGCAGGATCATCATTAAAACCATCATACTTGC
TGACCATCGATGAACTGATCGGATTAACCAACCAAAATTGGCCTCGGTCATTATGTATTGAACCGAGGAAAAAGCCTCTGTAACGGTTGGTCGGTAGTAA
AAAGTCATAGCAAAACCGGTAGCGACTTGTACTAGAAAACAAGTAAGTGTAATTCCCCCTAAACAATAAAATATGTTGACATGGGGAGGAACATATTTAC
TAGTTATATCATCTGCAATTGCCTGAATCTCAAGACGTTCCTCAAACCAATCATATACTTTATTGAGATAGGTAACTAACCCGAGTCCCCCTCTAAGAGC
CGTATATGAAAATTTCATCTCGTACGGCTCAAGCAGAAACACACAAATTTTCAACGAATATTAGAAAAAAGGTTCAAAACTTCATCAGCCACTGAATTGG
GTCGATTTGCCTTGAAGATATCAAATAAGAAAAATCCGGAATATCTTCTTTGTGATGATAATGCCAAAAAATCTCAAGTTGGCGCGTCTTTCTTCCTTTC
CCTTATGTTGGTCATTAGAGGCTTCTTGACTTTTCTCTTCCCTATAAAGGATTTGTTTTTTTATGCGTAATATAGAAATTATCTTGTTGCGATCCTATGA
ATCAGTTCAATTAAAACCTTAGATTCATACTAGAGCCACGATGATTTAGTCTCAAGCTAAACAAAAGGCAAGGGTTCTTCGAATAAGAACCGCTTGATAA
TCATTTATTGAATCAGTGTAATGACTCGACAAAATCGAGAGAAAAAAAGTTGTCTTTTGGGCAAACAAAATTGGAAGGAAGAAAATTTCTCTTTTATTTT
TATTTAAGAACTACTTGAATTTTTCAGTCTGGTTGCGAGGTCTTAATAGTGAGTATGAATCATAGTTCCATTTTTTTTTTGATCCACTCTATCTATTTCG
TGTTCCAGATACTAGAATAAATAATATCTGACGAATTAGAATCATCTTGATAGAGATAACAGGCCCTTTCTATGTATTATCAATAGGATCAATTCTAACA
AGTCACACACTCATATTCCAGAGATACCGAAACAAAAAAATTCCGCGGTCGAACTACCATAATATCTAGAAATGTAGATCTTAAACTAGAAAGGCTTTTC
TGGATGGAAAAACTCTGACTTCCTAGTTTTAGTTAGTAGAAACTTAATTGGTTAAAATTCCGTCCAGTAAAACGGAAGAATTATAAATTTCTAAAATGAT
AGATAGGAATATAGCGA