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Detailed information on CNT30193051


BLAST search results

BLAST vs Swiss-Prot:
sp|P00228|FER_WHEAT, E-value = 2e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30398821Secale cerealeTriticum turgidum53.941.4993.3373forward
CNT30442843Secale cerealeAegilops tauschii51.7354.6691.9358forward
CNT30256669Secale cerealeAvena sativa33.8228.8293.16234forward
CNT30669992Secale cerealeTriticum dicoccoides70.2374.8894.44486forward

Expression of CNT30193051

Peptides detected in this lncRNA

>peptide 1 (72 aa)
QRDTSAIRIHFSTSSYVHASITTVVYLTVQKGSNSKTLLLEQTMHRAIHSSTKQSVYLAMSTHACMIQKEII*

Sequence

>CNT30193051
CAGAGAGACACCTCAGCCATCAGGATTCATTTCAGTACGTCGAGTTACGTACACGCTAGTATTACGACAGTAGTATATCTTACGGTACAAAAAGGTAGTA
ATTCGAAGACATTATTACTTGAGCAAACCATGCATCGAGCAATTCATTCGAGCACAAAACAATCGGTGTATCTGGCGATGTCCACGCATGCATGCATGAT
ACAGAAGGAGATAATATGATATCAGCTCGATCCTCTTGCAAAGAGAGATAGGTATAGCAGCTTATGCGGTGAGCTCCTCCTCTTTGTGGGTCTCGATGAC
GATGTCGGACTTGGGGTAGGCGTGGCAGGTGAGCACCCACCCTGCCTCCATCTGGTCGATCCCCTCCTCCTCGGCCTGGTCGAGGATGTAGACGTCGTCG
GGGACCTCCAGCTCCACCTCGCCCTCGGGCGTCACCAGCTTCACCTTGTACGTCGCCTGCGCGCGGAGCCTGGCTCCCCGCACCTGCTTGGCGGCGGCGA
GGCTGAGGGCCGCGGGCGCCAGGGCCACGCGGGGCGCCGGTGGCGCGACGGTGCGCAGGGAGAAGGGCGCGCGGAGGCTCAGTGCGGCGGCCATTGTTGG
CTAGCTAGCTGGAGCTTGGACGCTCTGTCTCTGTGTGGCTGAGGAGCTGGAGAGGATAGGCGAGCGAGCTAGGGGATGGAGGAGTGAGGGGG