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Detailed information on CNT30192091


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 5e-153

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-131

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30722025Secale cerealeTriticum spelta80.7578.191.04692forward

Expression of CNT30192091

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGMPSLSWILALTLSIVSEDSTSNVMVFPVRVFTKICMPPRSLSTRWRVDSFWML*

>peptide 2 (53 aa)
MPSLSWIFAFTLSMVSDDSTSKVIVLPVRVLTKICMPPRRRRTRWRVDSFWML*

>peptide 3 (34 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVIVLP

Sequence

>CNT30192091
ACCATGGCTCAGCAAAGCTGTAGCACAGCAGCAGAAGTTTGAGATACAACCGAGCATACAATGCATCACAGTACCATAGAAACATAAGACACTACCAAGA
TGAAAGACACAAACGAGACACCACCAGTAGGACACCGAAGACACAAGACTTGGGAACCCTAGAGACAGAAGCAGCTCCAGGGCCAGGCACTTTACTGGCC
ACCACGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGCCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGG
CGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTCAGATGACTCCACCTCCAAGGTGATTGTCTTGCCAG
TGAGGGTCTTGACAAAGATCTGCATGCCACCACGGAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATC
CTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGAC
TCAACCTCCAATGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAGATCTGCATGCCACCCCGGAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGA
TGTTGTAGTCCGCCAGGGTGCGACCGTCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGC
CTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATTGTCTTGCCAGT