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Detailed information on CNT30191758


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG84|UBI4P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693916Secale cerealeOryza sativa71.7773.21861093forward
CNT30674319Secale cerealeSetaria viridis53.8482.2592.07820forward
CNT30641270Secale cerealeNymphaea colorata70.6553.8884.481076forward
CNT30305252Secale cerealeTriticum aestivum55.6899.391.75848forward
CNT30553671Secale cerealeOryza glaberrima60.1478.7686.03916forward
CNT30669573Secale cerealeTriticum dicoccoides59.2992.0590.14903forward
CNT3073617Secale cerealeBrassica juncea70.6531.8584.291076forward
CNT30141987Secale cerealeLolium perenne72.1673.0792.361099forward
CNT307928Secale cerealeZea mays60.3477.187.81919forward
CNT30229013Secale cerealeAnanas comosus70.8568.4286.471079forward
CNT30652285Secale cerealeRosa chinensis58.8373.6286.72896forward
CNT30716337Secale cerealeMalus domestica golden70.1286.286.71068forward
CNT30689801Secale cerealeTriticum urartu72.3679.6891.471102forward
CNT30722465Secale cerealeTriticum spelta54.9674.1489.13837forward
CNT30348745Secale cerealeEragrostis tef69.1494.7886.421053forward
CNT30596296Secale cerealeOryza meridionalis71.7779.3886.461093forward
CNT30110940Secale cerealeOryza longistaminata70.5239.686.411074forward
CNT30321313Secale cerealeAsparagus officinalis70.8582.384.341079forward
CNT30116770Secale cerealeOryza nivara71.7778.1886.091093forward
CNT30593897Secale cerealeEragrostis curvula60.2181.6690.84917forward
CNT30174646Secale cerealeVigna angularis57.2683.6986.47872forward

Expression of CNT30191758

Peptides detected in this lncRNA

>peptide 1 (98 aa)
MVKYDIKITKGNCADFATAPRNNNLKNHRRFTPFASPRRHQCSPIQTIIPPEHTSVPGQLISCRHNSGLTYKFTKAASQHFSFQIQPNITMHHSMVET*

>peptide 2 (61 aa)
MRRCWSGGMPSLSWILAFTLSMVSEDSTSRVMVLPVRVLTKICMPPRSLSTRCSVDSFWML*

>peptide 3 (61 aa)
MRRCWSGGMPSLSWILAFTLSMVSEDSTSRVMVLPVRVLTKICMPPRSLSTRWRVDSFWML*

>peptide 4 (61 aa)
MRRCWSGGMPSLSWILALTLSIVSEDSTSNVMVFPVRVFTKICMPPRSLSTRWRVDSFWML*

>peptide 5 (30 aa)
MVLPVRVFTKICMPPRSLSTRWRVDSFWML*

>peptide 6 (30 aa)
MQSDSNHYPTGAHISTRATNQLQTQFRAHL*

Sequence

>CNT30191758
TTGCATCGTCTTCAATTTTTATTATTAATGAGCTATTAGCTTCATAGGACAATGGTTAAATACGACATCAAAATTACAAAAGGGAATTGTGCGGATTTCG
CAACTGCACCAAGGAATAATAACCTCAAAAATCACCGTCGATTTACCCCCTTTGCATCACCTCGACGACATCAATGCAGTCCGATTCAAACCATTATCCC
ACCGGAGCACACATCAGTACCAGGGCAACTAATCAGCTGCAGACACAATTCAGGGCTCACTTATAAGTTCACCAAAGCTGCTTCACAACACTTTAGTTTT
CAGATACAACCAAACATAACGATGCATCACAGTATGGTAGAAACATAGAAACGACCAGGACGACAGACACAGACACCATTGGAGGACATAAGACCTGTGA
ACCCGCATAAGCCACTCCACTGCCAGGCACTTACTGGCCACCACGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGG
GTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCAATTG
TGTCCGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCATGCCACCACGGAGCCTGAGCACCAGGTGGAGGGTGGA
CTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC
TGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACCTCCAATGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAGATCTGCATGCCACCCC
GGAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCTAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTG
CTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTATCAATGGTGTCTGAGGATTCGACCTCCAGGGTGATGGTCTTGCCGGTGAGG
GTCTTAACAAAGATCTGCATGCCACCGCGGAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCTAGGGTGCGGCCATCCTCCA
GCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTATCAATGGTGTCTGAGGACTCGAC
CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCATGCCACCGCGGAGCCTGAGCACCAGGTGTAGTGTGGACTCCTTCTGGATGTTG
TAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGA
CGTTGTCGATGGTGTCCGAGGAC