Detailed information on CNT30191529


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-174

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30242602Secale cerealeAvena sativa53.1580.4992.17920forward
CNT30461176Secale cerealeSaccharum spontaneum53.2127.0288.49921forward
CNT30141956Secale cerealeLolium perenne53.4482.9692.76925forward
CNT30689817Secale cerealeTriticum urartu55.3458.4991.96958forward
CNT30368741Secale cerealeSorghum bicolor53.3879.1187.88924forward

Expression of CNT30191529

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MNQRYNRGGIVTNTPLDDTSNKYISEPRLYIRRSTMLIFRRNSSTNILGDISAQPLASWGVYIV*

>peptide 2 (30 aa)
MHQKEANKKTQMTTADTIQGSLIYHGSAKL*

>peptide 3 (49 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVIVLPVRVFTKICICKHKT*

>peptide 4 (51 aa)
RLNASERSKQENTDDNSRHNSGITYLPWLSKAVAQQQKFEIQPSIQCITVP*

>peptide 5 (53 aa)
MPSLSWIFAFTLSMVSDDSTSKVIVLPVRVLTKICMPPRRRRTRWRVDSFWML*

>peptide 6 (61 aa)
MRRCWSGGMPSLSWILALTLSIVSEDSTSNVMVFPVRVFTKICMPPRSLSTRCSVDSFWML*

>peptide 7 (61 aa)
MRRCWSGGMPSLSWILALTLSIVSEDSTSNVMVFPVRVFTKICMPPRSLSTRWRVDSFWML*

Sequence

>CNT30191529
AGATTAAATGCATCAGAAAGAAGCAAACAAGAAAACACAGATGACAACAGCAGACACAATTCAGGGATCACTTATTTACCATGGCTCAGCAAAGCTGTAG
CACAGCAGCAGAAGTTTGAGATACAACCGAGCATACAATGCATCACAGTACCATAGAAACATAAGACACTACCAAGATGAAAGACACAAACGAGACACCA
CCAGTAGGACACCGAAGACACAAGACTTGGGAACCCTAGAGACAGAAGCAGCTCCAGGGCCAGGCACTTTACTGGCCACCACGGAGACGAAGCACCAAGT
GAAGGGTGGACTCCTTCTGGATGTTATAGTCCGCCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCC
CTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTCAGATGACTCCACCTCCAAGGTGATTGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGC
ATGCCACCACGGAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGA
TGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACCTCCAATGTGATGGTCTT
TCCGGTGAGGGTCTTCACGAAGATCTGCATGCCACCCCGGAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGA
CCGTCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCG
AGGACTCAACCTCCAATGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAGATCTGCATGCCACCCCGGAGCCTGAGCACCAGGTGTAGTGTGGACTCCTT
CTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATC
TTAGCCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATTGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATCTGTAAACACAAAA
CATAAAGAGTAAGGCACTGTACAAGGGAAATCAGCAGTAAATCAAACAATACATGAACCAGAGGTACAACAGAGGTGGAATTGTAACTAATACTCCCCTA
GATGATACATCAAACAAATATATTAGCGAACCAAGATTATACATCAGACGATCGACCATGCTAATTTTTAGAAGAAATAGTAGCACAAATATACTAGGAG
ATATATCAGCACAACCTTTAGCCTCATGGGGAGTATATATAGTCTAATTTTAGACAACAAGCTGGATAAATTCGGAACAAGCTTTAGCCTCATGGGGAGT
ACATAGTCATGGAAGAATCAACTGACAGGTATATAAGAGTTGAATCAAACGACTAAGCTTACAAGCAGCTAAAGGCCGAACGACTAAGTTACCAAATTCA
GGCGTATCCCTTGCAGATCAGGCATATGTGCACAATATCAGGGCAACAAAATCAGGAATCAACAAGAATACTAGAACGTTTATCAACCACAAATAGAATT
AGCTGACTAATCATACATAGATAGATAGACC