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Detailed information on CNT30191230


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-111

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-97

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30583297Secale cerealeEchinochloa crusgalli51.5624.0992.01463forward

Expression of CNT30191230

Peptides detected in this lncRNA

>peptide 1 (44 aa)
NDCAAHRTPHILKENWDSTGQKVKLALKFQKYTHIRRKKCAKRR*

>peptide 2 (48 aa)
MPSLSWILALTLSMVSDDSTSRVMVLPVRVFTKICMPPRSLSTKWRVDS

>peptide 3 (61 aa)
MRRCWSGGMPSLSWILAFTLSMVSDDSTSRVMVLPVRVFTNICMPPRSLSTRWSVDSFWML*

>peptide 4 (46 aa)
MCEKKIINFYRSATRKYVPKADKIHQKDHKKPRITQQQASWIMDRI*

Sequence

>CNT30191230
CAACGACTGTGCAGCACACAGAACTCCACATATCTTAAAAGAAAATTGGGATTCAACAGGACAGAAAGTAAAGTTGGCACTTAAATTTCAGAAGTACACA
CATATCAGAAGGAAAAAATGTGCGAAAAGAAGATAATCAACTTTTACCGGTCAGCAACCAGAAAATATGTGCCAAAAGCAGATAAAATTCATCAGAAAGA
TCACAAGAAACCACGTATAACACAACAGCAAGCATCATGGATCATGGATCGAATTTAGAGCTCACTTATTCATAGTTCAAAGTTGCTGCACATCAGTAAA
AGTTCAAAGATACAGCATTACAGTACGGTACAGCAACAAAGACAGATCAGGCAAAGGACACCGAAGACAGAAGCAGAGCTCAATCGCCAGGAGCTTACTG
GCCACCACGCAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATG
AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCGATGGTGTCAGATGACTCCACCTCCAGGGTGATGGTCTTGC
CGGTGAGGGTCTTCACAAATATCTGCATGCCACCACGGAGCCTGAGCACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGGCC
ATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAT
GACTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCATGCCACCACGGAGCCTGAGCACCAAGTGGAGGGTGGACTCCTT