Detailed information on CNT30191206


BLAST search results

BLAST vs Swiss-Prot:
sp|O23755|EF2_BETVU, E-value = 0.0

BLAST vs NONCODE:
NONGMAT000778, E-value = 4e-46

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640184Secale cerealeNymphaea colorata24.138.9781.69295forward
CNT30276060Secale cerealeChenopodium quinoa26.3950.9583.28323forward
CNT3019597Secale cerealeCitrullus lanatus22.9637.5783.63281forward
CNT30395070Secale cerealeTriticum turgidum62.510097.39765forward
CNT30561656Secale cerealeActinidia chinensis70.3461.583.39861forward
CNT3085191Secale cerealeVigna radiata12.4221.283.55152forward
CNT30612508Secale cerealeArabis alpina42.5720.5380.42521forward
CNT30683923Secale cerealeTriticum urartu62.5883.7297.65766forward
CNT30722731Secale cerealeTriticum spelta17.5742.0794.42215forward
CNT30361520Secale cerealeSorghum bicolor25.8246.283.86316forward
CNT30596122Secale cerealeOryza meridionalis28.275092.77346forward
CNT30332479Secale cerealeDioscorea rotundata11.5249.8285.82141forward
CNT3051057Secale cerealeCucumis sativus4.5824.4589.2956forward

Expression of CNT30191206

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MLVGGLAHDSAAGLLQNSLTEGDNRRGNNNFSTTHEVLLQILQTDFKVKLSSSSNDMLTRLLNATENHRVRLRQP

>peptide 2 (94 aa)
MFSSHNAPSFDAHWNPATTESLISFRYCTPLHMSTTMLGPVVSGPKHQIFLARSLSHPNSSDRILERTLGSSRGPMRPSSIASANPSSNGRASM*

>peptide 3 (40 aa)
MTVRQDFSRTVSRKETTGGETIISAPPMKSSCRSFKQISR*

>peptide 4 (51 aa)
AQKQTQHNKNNHQLTTDISSKFNICYITTTVIKTIVSVAPTYKQQDSKEDT*

>peptide 5 (33 aa)
MMSQWSNTHWGKAWPDVAALRVLENPKDSMTGR*

Sequence

>CNT30191206
AGCACAAAAGCAAACACAGCACAATAAAAATAACCACCAGCTGACGACGGATATATCATCTAAGTTTAACATCTGTTACATCACCACGACCGTCATCAAA
ACCATAGTCTCAGTAGCACCAACATACAAACAACAAGATAGTAAGGAAGACACATAGGGAGAAAAATACCGCGCCTCCCTTCACAGCAAGAGCCAGCAGC
AAAACATGACCCCCAAAATTTAGAGCTTGTCCTCGAAATCGGATAGGGGGGTCATCTGCTCCTTGAGACCCTTCCTCTTGCGGATCTCCGTCACGAGCGT
CGCCGACTGGGTGCCGGGGTCCAGAGGGTCGGAAGCCATGATGTCCCAGTGGTCGAACACGCACTGGGGGAAGGCCTGGCCGGACGTCGCCGCCCTCAGG
GTGCTCGAGAACCCGAAGGACTCGATGACAGGCAGGTAGGCCTTGATGTTGTAGAGTGGGGTACCTTGCCTCTGCATCTCCTCGAACACGTGCCCTCTCT
TCTGATTGAGAACACCATAGATACCACCAAGTGCGTTCTCCGGGGCCTGGATCTCAACCAGGTACACGGGCTCCAGCAGCCTTGGCTTGGCAGTGAGCTG
AGAAGCGTAAATGACCCTCCTCGCCGTTGGGATAACCTGACCACCACCCCTGTGAATAGCATCAGTGTGGAGAACAACATCACAGACCTCATAGCAGATA
CCACGCATGTTCTCCTCACACAATGCTCCTTCCTTTGATGCCCACTGGAACCCAGCCACAACAGAGTCCTTGATTTCATTCAGATACTGCACTCCCTTAC
ACATGTCAACAACCATGTTGGGGCCAGTCGTCTCAGGTCCAAAGCACCAAATCTTCTTGGCGAGATCCTTGTCCCACCCGAACTCCTCAGACAGGATCTT
GGAGCGCACCTTAGGATCATCACGTGGGCCAATGCGGCCATCATCAATAGCCTCAGCCAATCCCTCCTCCAATGGGCGAGCTTCCATGTAAAGACGGTTA
TGCTTGTTGGGGGACTTGCTCATGACAGTGCGGCAGGACTTCTCCAGAACAGTCTCACGGAAGGAGACAACAGGAGGGGAAACAATAATTTCAGCACCAC
CCATGAAGTCCTCCTGCAGATCCTTCAAACAGATTTCAAGGTGAAGCTCTCCAGCTCCAGCAATGATATGCTCACCAGACTCCTCAATGCTACAGAGAAC
CATAGGGTCAGACTTCGCCAGCCG