Detailed information on CNT30191122


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-158

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30306465Secale cerealeTriticum aestivum68.7599.3490.35902forward
CNT30141687Secale cerealeLolium perenne67.3876.3492.76884forward
CNT30595768Secale cerealeOryza meridionalis66.9263.8589.29878forward
CNT30148670Secale cerealeBrachypodium distachyon53.1273.5291.82697forward
CNT30576634Secale cerealeOryza barthii52.8264.5991.92693forward

Expression of CNT30191122

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGMPSLSWILAFTLSMVSEDSTSRVMVLPVRVLTKICMPPRSLSTRWRVDSFWML*

>peptide 2 (61 aa)
MRRCWSGGMPSLSWILAFTLSMVSEDSTSRVMVLPVRVLTKICMPPRSLSTRCSVDSFWML*

>peptide 3 (98 aa)
MVKYDIKITKGNCADFATAPRNNNLKNHRRFTPFASPRRHQCSPIQTIIPPEHTSVPGQLISCRHNSGLTYKFTKAASQHFSFQIQPNITMHHSMVET*

>peptide 4 (30 aa)
MQSDSNHYPTGAHISTRATNQLQTQFRAHL*

>peptide 5 (29 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSR

>peptide 6 (53 aa)
MPSLSWILALTLSIVSDDSTSRVMVLPVRVFTKICMPPRSLSTRWRVDSFWML*

Sequence

>CNT30191122
AAAATTGCATCGTCTTCAATTTTTATTATTAATGAGCTATTAGCTTCATAGGACAATGGTTAAATACGACATCAAAATTACAAAAGGGAATTGTGCGGAT
TTCGCAACTGCACCAAGGAATAATAACCTCAAAAATCACCGTCGATTTACCCCCTTTGCATCACCTCGACGACATCAATGCAGTCCGATTCAAACCATTA
TCCCACCGGAGCACACATCAGTACCAGGGCAACTAATCAGCTGCAGACACAATTCAGGGCTCACTTATAAGTTCACCAAAGCTGCTTCACAACACTTTAG
TTTTCAGATACAACCAAACATAACGATGCATCACAGTATGGTAGAAACATAGAAACGACCAGGACGACAGACACAGACACCATTGGAGGACATAAGACCT
GTGAACCCGCATAAGCCACTCCACTGCCAGGCACTTACTGGCCACCACGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGC
CAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCG
ATAGTGTCAGACGACTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGAGTCTTCACGAAGATCTGCATGCCACCACGGAGCCTGAGCACCAGGTGGAGGG
TGGACTCCTTCTGGATGTTGTAGTCCGCTAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTT
GTCCTGGATCTTGGCCTTCACGTTATCAATGGTGTCTGAGGATTCGACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCATGCCA
CCGCGGAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCTAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGAC
GCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTATCAATGGTGTCTGAGGACTCGACCTCCAGGGTGATGGTCTTGCCGGT
GAGGGTCTTAACAAAGATCTGCATGCCACCGCGGAGCCTGAGCACCAGGTGTAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCC
TCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCCGAGGACT
CGACCTCGAGGG