Detailed information on CNT30190430


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30291964Secale cerealeTriticum aestivum61.28100.2994.2345forward
CNT30222858Secale cerealeHordeum vulgare73.1881.2691.02412forward
CNT30390514Secale cerealeTriticum turgidum69.6371.7995.66392forward
CNT30438687Secale cerealeAegilops tauschii53.6488.0594.37302forward
CNT30255378Secale cerealeAvena sativa15.8120.9484.2789forward
CNT30719808Secale cerealeTriticum spelta15.6320.6686.3688forward

Expression of CNT30190430

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MHARHGACMVDDRSSSCSMSSRSWCRTCTGRCRSRSFLRSKTSSVGLELRRWRGFDWL*

>peptide 2 (37 aa)
MHKAQTHVVKPGRFYLEGRFTTSMAWHLTADAGQVHR*

Sequence

>CNT30190430
CACAACATCCTTAATCTTGCTTCATGATAATTTATAATTTTCTCAGTGCTCTCAACTCTTAAGCAGTGTTTTTGTGGCATGAAGAAGAAGAAGAAAAAGA
AGGTGATGATATATGCATAAAGCACAGACACATGTGGTTAAACCAGGGAGATTTTATTTAGAGGGCCGGTTTACAACAAGCATGGCATGGCACCTGACTG
CTGATGCAGGTCAGGTGCATAGATAAAGGCCCTCGATCAGGTTGCGGTTACATGGTAAGGTAGTAGTAGATCGATACGACGATGCACGCACGGCACGGTG
CATGCATGGTCGATGATCGATCTAGCAGCTGCAGCATGAGCAGCCGCAGCTGGTGCCGCACTTGCACTGGGCGGTGCCGCAGCCGCAGTTTCCTCCGCAG
CAAGACATCCTCGGTTGGGTTGGAGCTTCGGAGATGGAGAGGCTTTGATTGGCTATGAGCTTCTTGTGTGCTTCTTGCTGGCTTGAGGAATAATGGAGGG
GCGTGAAGGCCTATTTATAGGCAGGAGGAACGAGGAGAAGAGATGCCGCACGCACGTATAGGT