Detailed information on CNT30190429


BLAST search results

BLAST vs Swiss-Prot:
sp|Q4LB23|METK2_HORVU, E-value = 1e-74

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30667060Secale cerealeTriticum dicoccoides56.2142.0597.38267forward
CNT3066706Secale cerealeLeersia perrieri33.2646.4788.61158forward
CNT30686961Secale cerealeTriticum urartu56.2130.897.38267forward
CNT30477100Secale cerealeArabidopsis halleri25.4730.6387.6121forward
CNT30363315Secale cerealeSorghum bicolor48.6327.8389.18231forward

Expression of CNT30190429

Peptides detected in this lncRNA

>peptide 1 (36 aa)
RGSCRCHRSRRTQTGAQAHQWHMKSAQCSGVRDRWR*

>peptide 2 (54 aa)
MRTVCTRTGTMAPPSFRYSMVTWVFPSGLSQAQVPFLRTSVRRAPSLVASMWVRG

Sequence

>CNT30190429
CGGGGATCTTGCCGGTGCCATAGGAGTCGACGAACACAGACAGGGGCTCAGGCACACCAATGGCATATGAAATCTGCACAATGCAGCGGCGTGCGAGACC
GCTGGCGATGATGCTCTTGGCAGCCTGCCTGGCAATGTAGGCGCCACTGCGGTCGACCTTGGTCGGGTCCTTGCCAGAGAAGGCGCCGCCGCCGTGGGCT
CCCCAGCCACCGTAGGTGTCGATGATGATCTTGCGGCCGGTGAGACCGGCGTCACCGTGAGGTCCGCAGCAATCTCATCGTTGGTGACAGTCTCGTCATG
CTGGGTGGAGATGAGGACTGTGTGTACACGAACAGGCACCATGGCACCACCCTCGTTTAGGTACTCAATGGTAACCTGGGTCTTTCCGTCAGGCCTGAGC
CAGGCACAGGTGCCATTCTTGCGGACCTCAGTAAGGCGAGCTCCAAGCTTGGTGGCGAGCATGTGGGTGAGAGGC