Detailed information on CNT30190327


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30222985Secale cerealeHordeum vulgare37.8837.3988175forward
CNT30683064Secale cerealeTriticum urartu27.0626.6591.2125forward

Expression of CNT30190327

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MAWPLLCSCRQAGAYIHTKTPDQAGLHGSRSMDQS*

>peptide 2 (36 aa)
MYRLNHRIFYLGVYMHGMAPALLMQAGRRLYTYKDP*

>peptide 3 (60 aa)
MIDYRSSSCSRSSRSWCRTCTGCRSRSFLRSKTSLRLLGIGWRLWLVLARSFFYSSCLLV*

Sequence

>CNT30190327
AGGGCCATAAGCTGGTCTATAACACAAACACATTTATAGGCTAGGGTACTTTGATGTCGAAAAACACATGTATAGGTTAAACCACCGGATATTTTATTTA
GGGGTTTACATGCATGGCATGGCCCCTGCTCTGCTCATGCAGGCAGGCAGGCGCTTATATACATACAAAGACCCCTGATCAGGCAGGGTTACATGGTAGT
AGATCGATGGATCAATCATAGATATGATGCACGCGCGCGGTAGGTGCATGCATGATCGATTATCGATCTAGCAGCTGCAGCAGGAGCAGCCGCAGCTGGT
GCCGCACTTGCACTGGCTGCCGCAGCCGCAGCTTCCTCCGCAGCAAGACATCTTTGAGGTTGCTTGGGATTGGATGGAGGCTTTGGTTGGTGTTGGCTAG
GAGCTTCTTCTATTCTTCTTGCTTGTTGGTTTGAGTAAGAATGGCAGGCAGCGAGGGCGATT