Detailed information on CNT30189758


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 5e-175

BLAST vs NONCODE:
NONSTUT001352, E-value = 1e-39

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30395723Secale cerealeTriticum turgidum83.8697.8694.12868forward
CNT30666302Secale cerealeTriticum dicoccoides51.01100.9692.23528forward

Expression of CNT30189758

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MPQGLQPSQEGRSCRLGRVGRRSHRVGRRQRGTPRLHP*

>peptide 2 (57 aa)
MWSARFSSGPLPVTIAWTKKPNIENMARRPFLISFTLSSANASGSSAKPRGSKLPPG*

>peptide 3 (32 aa)
LVNHDITTKWSDQCKARHGSGQIEPCFCTKSS*

>peptide 4 (29 aa)
MAQRQWITSNSRFLEKVSGSAESPAVSQP*

>peptide 5 (91 aa)
MVRPMQGATWKRTNRTVLLHKILVIYIMVVQPRLHNNTLHGVHNLLDILLAGDKVGCERPCVVADRVSDVVGEVLKWALARDDSLDKEAEH*

>peptide 6 (50 aa)
MVTRASPKRAKDGTFFTALPAKVEEERDMVAAAIGKLRKVSAVLYGFSKR*

>peptide 7 (51 aa)
MISQQNGQTNARRDMEADKSNRAFAQNPRNLHHGSTTETAQQYASRRAQSS*

Sequence

>CNT30189758
CTCGTGAACCATGATATCACAACAAAATGGTCAGACCAATGCAAGGCGCGACATGGAAGCGGACAAATCGAACCGTGCTTTTGCACAAAATCCTCGTAAT
TTACATCATGGTAGTACAACCGAGACTGCACAACAATACGCTTCACGGCGTGCACAATCTTCTTGACATCTTACTTGCCGGGGACAAAGTTGGTTGCGAA
CGCCCATGCGTTGTTGCTGACAGGGTCAGCGATGTGGTCGGCGAGGTTCTCAAGTGGGCCCTTGCCCGTGACGATAGCTTGGACAAAGAAGCCGAACATT
GAGAACATGGCGAGGCGACCGTTCTTGATCTCCTTCACCTTGAGCTCGGCGAATGCCTCAGGGTCTTCAGCCAAGCCAAGAGGGTCGAAGCTGCCGCCTG
GGTAGAGTGGGTCGACGATCTCACCGAGTGGGCCGCCGGCAACGCGGTACCCCTCGACTGCACCCATGAGCACGACCTGGCATGCCCAAATAGCAAGGAT
GCTTTGTGCGTGGACGAGACTGGGGTTGCCGAGGTAGTCGAGACCACCCTCACTAAAGATCTGGGAGCCGGCCTTGAACCAAACAGCCTCGCCGAACTTG
ACGCCGTTGCGGGCGAGCAACTCAGGGAAGACACAACCAAGTGCACCAAGCATGGCCCAACGACAGTGGATCACCTCTAACTCCCGGTTCTTGGAGAAGG
TCTCAGGGTCAGCTGAAAGTCCGGCAGTGTCCCAACCATAGTCGCCAGGGAACTCACCGGTCAAGTAGCTCGGGGGCTCACCGGAGAGTGGGCCGAGGTA
GAGCACACGGTCAGCGCCGTACCATGGGCTGCCAGAGGAAACCTGCTTCGCCTTCGTTGCGGTCTTGCGCATGGTGACTCGGGCCTCGCCAAAGAGAGCC
AAAGATGGTACATTCTTCACTGCCTTGCCGGCAAAGGTCGAGGAGGAGAGGGACATGGTGGCTGCGGCCATTGGAAAGCTAAGAAAAGTGTCCGCTGTGT
TGTATGGGTTCTCAAAGAGATGAGTGAGTGTGGAG