Detailed information on CNT30189591


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 3e-175

BLAST vs NONCODE:
NONSTUT001352, E-value = 2e-32

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30441267Secale cerealeAegilops tauschii66.7389.4793.73654forward
CNT30252939Secale cerealeAvena sativa81.9475.4787.92803forward

Expression of CNT30189591

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MWSARFSSGPLPVTIAWTKKPNIENMARRPFLISFTLSSANASGSSAKPRGSKLPPG*

>peptide 2 (80 aa)
RTNLALLLPKILVIYIMVVQPRLHNNTLRGVHNLLDILLAGDKVGCERPCVVADRVSDVVGEVLKWALARDDSLDKEAEH*

>peptide 3 (29 aa)
MAQRQWITSNSRFLEKVSGSAESPAVSHP*

>peptide 4 (50 aa)
MVTRASPKRAKDGTFFTALPAKVEEERDMVAAAIGKLRKVSAVLYGFSKR*

>peptide 5 (38 aa)
MPQGLQPSQEGRSCRLGRVGRRSHRVGRRQRGTPRRHP*

>peptide 6 (35 aa)
TDKSCIAFAKNSRNLHHGSTTETAQQYASRRAQSS*

Sequence

>CNT30189591
GACGGACAAATCTTGCATTGCTTTTGCCAAAAATTCTCGTAATTTACATCATGGTAGTACAACCGAGACTGCACAACAATACGCTTCGCGGCGTGCACAA
TCTTCTTGACATCTTACTTGCCGGGGACAAAGTTGGTTGCGAACGCCCATGCGTTGTTGCTGACAGGGTCAGCGATGTGGTCGGCGAGGTTCTCAAGTGG
GCCCTTGCCCGTGACGATAGCTTGGACAAAGAAGCCGAACATTGAGAACATGGCGAGGCGACCGTTCTTGATCTCCTTCACCTTGAGCTCGGCGAATGCC
TCAGGGTCTTCAGCCAAGCCAAGAGGGTCGAAGCTGCCGCCTGGGTAGAGTGGGTCGACGATCTCACCGAGTGGGCCGCCGGCAACGCGGTACCCCTCGA
CGGCACCCATGAGCACGACCTGGCATGCCCAAATAGCTAGGATGCTTTGCGCGTGCACAAGGCTGGGGTTGCCGAGGTAGTCGAGACCACCCTCACTAAA
GATCTGGGAGCCGGCCTTGAACCAAACAGCCTCGCCGAACTTGACGCCGTTGCGGGCGAGCAACTCAGGGAAGACGCAACCAAGTGCACCAAGCATGGCC
CAACGACAGTGGATCACCTCCAACTCCCGGTTCTTGGAGAAGGTCTCAGGGTCAGCCGAAAGTCCGGCTGTGTCCCACCCATAGTCACCTGGGAACTCAC
CGGTCAAGTAGCTCGGAGGCTCACCGGAGAGTGGGCCGAGGTAGAGCACACGGTCAGCGCCGTACCATGGGCTGCCAGAGGAAACCTGCTTCGCCTTCGT
TGCGGTCTTGCGCATGGTGACTCGGGCCTCGCCAAAGAGAGCCAAAGATGGTACATTCTTCACTGCCTTGCCGGCAAAGGTCGAGGAGGAGAGGGACATG
GTGGCTGCGGCCATTGGAAAGCTAAGAAAAGTGTCCGCTGTGTTGTATGGGTTCTCAAAGAGATGAGTGAGTGTGGAGAT