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Detailed information on CNT30189185


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 6e-48

BLAST vs NONCODE:
NONSTUT000620, E-value = 3e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30686644Secale cerealeTriticum urartu83.6925.8891.28436forward

Expression of CNT30189185

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MPSLSWILALTLSMVSELSTSRVMVLPVRVFTKIC

>peptide 2 (30 aa)
MNEKTVKINDRAPPTRRPRINQQVRRQGNY*

>peptide 3 (38 aa)
IKIIARSKQQTSKQFKHKIQNQQQLGQADLSEVHLFIT*

Sequence

>CNT30189185
ATATTAAGATCATTGCCAGATCAAAACAGCAAACAAGCAAGCAATTCAAGCACAAGATACAAAACCAACAGCAATTAGGGCAAGCAGATTTATCTGAAGT
TCACTTATTCATTACTTAACGATACTGCTTTTCCAGAAACGGTTTCAACCAACAGATAACACGCGGACTCGATAGTTCATTAAACCAACACATAGGACTG
ACATGAACGAGAAAACAGTTAAAATAAACGACAGGGCACCACCGACCAGACGACCCAGGATAAACCAGCAGGTCCGACGCCAGGGCAATTACTGACCACC
ACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCGAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGTCGC
TGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGGTCTTGCCGGTCA
GGGTCTTCACGAAGATCTGCA