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Detailed information on CNT3018856


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71V89|H33_GOSHI, E-value = 5e-44

BLAST vs NONCODE:
NONORUT005433, E-value = 1e-11

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674990Cyanidioschyzon merolaeSetaria viridis21.7412.539050forward
CNT30521250Cyanidioschyzon merolaeSetaria italica56.9635.1283.21131forward
CNT30698329Cyanidioschyzon merolaeQuercus lobata25.6512.589.8359forward
CNT3069241Cyanidioschyzon merolaeQuercus suber26.9614.0988.7162forward
CNT30200358Cyanidioschyzon merolaePisum sativum30.8711.4185.9271forward
CNT30709007Cyanidioschyzon merolaeGlycine max45.6544.1283.81105forward
CNT3048083Cyanidioschyzon merolaePrunus dulcis46.0915.182.08106forward
CNT30178172Cyanidioschyzon merolaeSecale cereale85.6535.8882.23197forward
CNT30283601Cyanidioschyzon merolaeTriticum aestivum82.1729.381.48189forward
CNT30398097Cyanidioschyzon merolaeTriticum turgidum86.9626.1480.5200forward
CNT30591253Cyanidioschyzon merolaeMusa acuminata25.6518.9186.4459forward
CNT3084857Cyanidioschyzon merolaeVigna radiata28.265.2986.1565forward
CNT30441386Cyanidioschyzon merolaeAegilops tauschii86.9641.6782.5200forward
CNT30254117Cyanidioschyzon merolaeAvena sativa81.7434.8881.91188forward
CNT30655661Cyanidioschyzon merolaeTriticum dicoccoides80.4334.281.08185forward
CNT30474628Cyanidioschyzon merolaeSaccharum spontaneum54.7810.684.13126forward
CNT30141394Cyanidioschyzon merolaeLolium perenne86.9631.282200forward
CNT306284Cyanidioschyzon merolaeZea mays21.7423.369050forward
CNT30720909Cyanidioschyzon merolaeTriticum spelta85.6530.1782.74197forward
CNT30368649Cyanidioschyzon merolaeSorghum bicolor86.9647.6282.5200forward
CNT30622400Cyanidioschyzon merolaeCajanus cajan61.315.4181.56141forward
CNT3053477Cyanidioschyzon merolaeAmborella trichopoda26.969.987.162forward
CNT30585391Cyanidioschyzon merolaeEchinochloa crusgalli85.6530.2682.23197forward

Expression of CNT3018856

Peptides detected in this lncRNA

>peptide 1 (75 aa)
YLSHQALERKLPDKQLRRLLVAPDLAKRHRTGAVTVRLLHTAHRRCRLACSLGCQLLPRRLATGRLASSLFRTYTS

Sequence

>CNT3018856
GCTATCTCTCGCACCAGGCGCTGGAAAGGAAGCTTCCGGATAAGCAGCTCCGTAGACTTTTGGTAGCGCCGGATCTCGCGAAGCGCCACCGTACCGGGGC
GGTAACGGTGCGGCTTCTTCACACCGCCCACAGACGGTGCCGACTTGCGTGCAGCCTTGGTTGCCAGCTGCTTCCGAGGCGCCTTGCCACCGGTCGACTT
GCGAGCAGTTTGTTTCGGACGTATACGTCA