Detailed information on CNT30188538


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30661706Secale cerealeTriticum dicoccoides48.7524.0796.15156forward

Expression of CNT30188538

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MHRHKRIRIQYKRYSQANELKLHFYVVLVIISSTYARRPT*

>peptide 2 (46 aa)
MDTYKSSTVIHEEKVIVITVKPTRPFTKHAPPQENQNTVQKIFSSK*

Sequence

>CNT30188538
CCGCAAAAAAAAGGTAGATTCATTCACCAATAATGGACACGTACAAATCAAGCACCGTTATTCATGAAGAAAAAGTAATAGTTATAACAGTAAAACCGAC
GAGGCCCTTCACTAAACATGCACCGCCACAAGAGAATCAGAATACAGTACAAAAGATATTCTCAAGCAAATGAATTAAAACTGCACTTTTACGTGGTCCT
CGTTATTATTAGCAGCACGTACGCACGTAGACCGACCTAACCAACCTCATGCATGCATGGCTAGTTACATTGGCAGGAACTTGGACTTGATGGCCTCCAC
CAGGCCGCCATCGATCTGGA