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Detailed information on CNT30188236


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30299285Secale cerealeTriticum aestivum68.5168.296.08459forward
CNT30225034Secale cerealeHordeum vulgare38.8143.2696.54260forward
CNT30393592Secale cerealeTriticum turgidum61.7958.3196.38414forward
CNT30664426Secale cerealeTriticum dicoccoides62.3957.1896.41418forward
CNT30685015Secale cerealeTriticum urartu62.3959.9796.41418forward

Expression of CNT30188236

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCGLASFLASGELRLTVGGAGGRWCCG

Sequence

>CNT30188236
ATGCCTTGATTAATCTGAGAAAATAGCCAGATATTACATAAACACCATCTTTTAGTGTACACACACCAACTCATCATCTCGACTCGCCCTCACATGCAAC
ATCTATCAGTCCGGACTCAGTCTCAAAACGGAAAGACATGCAGCAGCAGCATCCATCAGCCATGAAGTTGTCGGCCATGCCCGCGCGTGCACGCACGCGC
TAGAGCTAGAGAGCTGACCGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGGGGTCGAAGCTGCCGCCGGGGTAGAGCGGGTCCACGATC
TCGCCCAGCGGGCCGCCGGCCACGCGGTAGCCCTCCACGGCGCCCATGAGCACCACCTGGCAGGCCCAGATGGCGAGGATGCTCTGCGCGTGCACGAGGC
TGGGGTTGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCACGGGCTGCTGGAGGCGGCCACCTTGGGCTTGCCCGCCGTCTTGCGCATGGTGATGCGGCC
CTCGCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGGGGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGGCCGCCATTGCGCGCTGCGGACTC
GCTAGCTTTCTTGCTTCGGGTGAGCTGAGGCTGACTGTAGGAGGCGCTGGTGGTCGTTGGTGCTGTGGAG