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Detailed information on CNT30187726


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 3e-129

BLAST vs NONCODE:
NONSTUT001352, E-value = 2e-31

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30300127Secale cerealeTriticum aestivum10059.9294.9628forward
CNT30394768Secale cerealeTriticum turgidum10052.6495.06628forward
CNT30665503Secale cerealeTriticum dicoccoides10064.0894.27628forward

Expression of CNT30187726

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MVTRASPKRDDDGKFFIALPAKAGEESDMVVAAILIDG

>peptide 2 (29 aa)
MAQRQWITSSSRFLAKVSGSADSPAVSHP*

>peptide 3 (36 aa)
QGRRQGRADQSYLPGRVGRRSHRVVHRQCGSPRRRP*

>peptide 4 (87 aa)
LRVVGKAERIKATSRVEWVDDLTEWSTGNAVALDGAHEHDLTSPDGKDTLRVHKAWVAEVVEAALAEDLGSSLEPNSLTKLNAIAGK*

Sequence

>CNT30187726
CTCAGGGTCGTCGGCAAGGCCGAGCGGATCAAAGCTACCTCCCGGGTAGAGTGGGTCGACGATCTCACCGAGTGGTCCACCGGCAATGCGGTAGCCCTCG
ACGGCGCCCATGAGCACGACCTGACAAGCCCAGATGGCAAGGATACTTTGCGCGTGCACAAGGCTTGGGTTGCCGAGGTAGTCGAGGCCGCCCTCGCTGA
AGATCTGGGATCCAGCCTTGAACCAAACAGCCTCACCAAACTTAACGCCATTGCGGGCAAGTAGCTCCGGGAAGACACAACCGAGCGCGCCAAGCATGGC
CCAACGGCAGTGGATCACCTCCAGCTCACGGTTCTTGGCGAAGGTCTCGGGGTCAGCCGACAGCCCAGCGGTGTCCCACCCATAGTCGCCGGGGAACTCA
CCGCTCAGGTAGCTCGGGGGCTCACCAGAAAGTGGGCCGAGGTAGAGCACGCGGTCAGAGCCGTACCACGGGCTGCTAGAGGCAACCTTCTTGGCCTTTG
CCGCCGTTTTGCGCATGGTGACGCGGGCCTCCCCGAAAAGAGACGATGATGGCAAGTTCTTCATTGCCTTGCCGGCAAAGGCTGGGGAAGAGAGTGACAT
GGTGGTTGCAGCCATTTTGATCGATGGA