Detailed information on CNT30187165


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30374346Secale cerealeArabidopsis thaliana97.175.2989.32206reverse complement
CNT30393404Secale cerealeTriticum turgidum10018.199.53212reverse complement
CNT30555224Secale cerealeOryza glaberrima66.9810.8494.37142forward
CNT30575698Secale cerealeOryza barthii56.1315.4793.28119forward

Expression of CNT30187165

Peptides detected in this lncRNA

>peptide 1 (33 aa)
TKWIYNPSREWSYVNSRLMENNFHVRFREHFFR*

Sequence

>CNT30187165
GACCAAATGGATATATAATCCAAGCCGAGAGTGGAGTTACGTGAACAGCCGTCTGATGGAAAACAACTTTCACGTTCGGTTCAGAGAGCACTTTTTTCGT
TGAGAATAAGTCCTTCCCTTTTGTGTGAATTCCCCAGCGGCGAATTAACAACTTGTGGGGCCCTATCTATTCAATCTCTCGAGCCCCAAGAAAACCCCCC
TCTCCCTCGGAC