Detailed information on CNT30186990


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672741Secale cerealeSetaria viridis15.928.9293.2259forward
CNT30393881Secale cerealeTriticum turgidum69.8164.2795.75259forward
CNT30440426Secale cerealeAegilops tauschii66.3152.4596.34246forward
CNT30721746Secale cerealeTriticum spelta75.217.3594.62279forward
CNT30150825Secale cerealeBrachypodium distachyon66.5841.7289.88247forward

Expression of CNT30186990

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MIALSGLVGLGSRGSSLASETTRVPLHAVLVVGVTSLEHWLLSP

>peptide 2 (48 aa)
MWTEESRPQRKLITNITRLPKYRAKTTSILQYMSLMGNLEAANIDKQQ*

Sequence

>CNT30186990
AAATAGAAGCAAACATCCTAAACTAAAACAAAAAATAAGCACCAGCGGCTAACTCAAGCAACTCGACAAACAAATATCCAAGCATAATCTTCTTTATGTG
GACCGAAGAATCCAGACCACAGCGAAAACTGATAACAAACATCACCAGGTTACCAAAGTACCGAGCAAAAACGACATCCATACTGCAATACATGTCCTTG
ATGGGTAATCTAGAGGCAGCAAACATAGATAAACAGCAATGATAGCTCTAAGTGGCCTTGTCGGCCTTGGCAGCAGAGGCAGCAGCCTGGCCTCTGAGAC
GACCAGAGTTCCTCTTCACGCGGTACTTGTGGTAGGCGTTACCAGCCTTGAGCATTGGCTTCTCAGTCCTG