Detailed information on CNT30186674


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 1e-130

BLAST vs NONCODE:
NONBNAT007398, E-value = 5e-54

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30298862Secale cerealeTriticum aestivum77.4171.8796.27723forward
CNT30393694Secale cerealeTriticum turgidum71.9569.4296.73672forward
CNT30552254Secale cerealeOryza glaberrima56.152.5691.22524forward
CNT30440655Secale cerealeAegilops tauschii56.8553.194.54531forward
CNT30251387Secale cerealeAvena sativa63.9257.4693.13597forward
CNT30664564Secale cerealeTriticum dicoccoides76.1275.2496.62711forward
CNT30472898Secale cerealeSaccharum spontaneum56.153.6390.65524forward
CNT3013856Secale cerealeZea mays50.1143.9892.52468forward
CNT30684601Secale cerealeTriticum urartu71.4169.4196.55667forward
CNT30721831Secale cerealeTriticum spelta53.7559.2796.02502forward
CNT30345513Secale cerealeEragrostis tef5656.3692.16523forward
CNT30369293Secale cerealeOryza glumipatula59.6458.9490.13557forward
CNT30150713Secale cerealeBrachypodium distachyon39.7263.5392.45371forward
CNT3099595Secale cerealeOryza rufipogon51.7155.8491.72483forward
CNT30574623Secale cerealeOryza barthii56.152.0990.27524forward
CNT30582755Secale cerealeEchinochloa crusgalli55.8947.5492.72522forward
CNT30603457Secale cerealeOryza punctata52.3650.9991.41489forward
CNT30556694Secale cerealePanicum hallii64.2462.7691600forward

Expression of CNT30186674

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAQRQWITSSSRFLAKVSGSADSPAVSQP*

>peptide 2 (60 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCGLASFLASGELRLTVGGAGGRWCCG

Sequence

>CNT30186674
ATGCCTTGATTAATCTGAGAAAATAGCCAGATATTACATAAACACCATCTTTTAGTGTACACACACCAACTCATCATCTCGACTCGCCCTCACATGCAAC
ATCTATCAGTCCGGACTCAGTCTCAAAACGGAAAGACATGCAGCAGCAGCATCCATCAGCCATGAAGTTGTCGGCCATGCCCGCGCGTGCACGCACGCGC
TAGAGCTAGAGAGCTGACCGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGGGGTCGAAGCTGCCGCCGGGGTAGAGCGGGTCCACGATC
TCGCCCAGCGGGCCGCCGGCCACGCGGTAGCCCTCCACGGCGCCCATGAGCACCACCTGGCAGGCCCAGATGGCGAGGATGCTCTGCGCGTGCACGAGGC
TGGGGTTGCCGAGGTAGTCGAGCCCGCCCTCGCTGAAGATCTGGGACCCGGCCTTGAACCACACGGCCTCGCCGAACTTGACGCCGTTGCGGGCGAGCAG
CTCGGGGAAGACGCAGCCCAGCGCGCCGAGCATGGCCCAGCGGCAGTGGATCACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGGTCGGCCGACAGC
CCCGCGGTGTCCCAGCCGTAGTCCCCGGGGAACTCGCCGGTGAGGTAGCTCGGCGGGTCGCCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGT
ACCACGGGCTGCTGGAGGCGGCCACCTTGGGCTTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTCGCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGG
GGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGGCCGCCATTGCGCGCTGCGGACTCGCTAGCTTTCTTGCTTCGGGTGAGCTGAGGCTGACT
GTAGGAGGCGCTGGTGGTCGTTGGTGCTGTGGAG