Detailed information on CNT30186386


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30308114Secale cerealeTriticum aestivum22.2213.3595.59136reverse complement
CNT30395826Secale cerealeTriticum turgidum41.0117.1884.46251reverse complement
CNT30438033Secale cerealeAegilops tauschii22.8814.5485.71140reverse complement
CNT30655853Secale cerealeTriticum dicoccoides41.0144.5884.06251reverse complement
CNT30681623Secale cerealeTriticum urartu40.8510.6382.8250reverse complement
CNT30719766Secale cerealeTriticum spelta40.8520.4883.6250reverse complement

Expression of CNT30186386

Peptides detected in this lncRNA

>peptide 1 (88 aa)
MERVSQNLGLPLGAPKVGSTSCDGHRLAASSQGHGRVWRGAPDASEQSAPETTAPARRRRAWLPWQRAEKSVGDERRYTAPVLPPATAL

Sequence

>CNT30186386
GTGAATATTGTGTGATGTTTGCAAAACGTTTTGATCTCTTCACGTGATTTTCAGGTTTCACTAAAACTAGGACTCTGAATATCTTGTGATTTTTTTACTA
AAAAGCGCTTTCACCAATTTGTGATTTCCCTACTGTGTGCGATTGAAAAGCAGAGTGCATAGCTCGCATACTTCAAAGTTCAGTAGATATCTACTAGTAC
AGAGGTAGATCAAGCAATGAATCATCACTCACCTTTGCCTGTTTAGTTTGCATTGTGTTCGCATCTTCTAGTGCGACTGCGCGACCTCCGGCGGAATCTC
GGCCACCGGCTGCACGCGCTGCAGCTCCACCATCCACCATATCCCATGGAGCGGGTCAGCCAGAACCTTGGCCTGCCGTTGGGTGCACCGAAGGTGGGCA
GCACTAGCTGCGACGGCCACCGTCTTGCCGCCAGCAGCCAAGGCCACGGCCGGGTGTGGCGCGGCGCGCCTGACGCGAGCGAGCAGAGCGCGCCTGAGAC
AACGGCCCCAGCGCGCCGGAGACGTGCGTGGCTACCGTGGCAGCGGGCGGAGAAGAGCGTCGGAGACGAACGGCGCTATACAGCTCCGGTCTTGCCGCCG
GCCACGGCCCTG