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Detailed information on CNT30185941


BLAST search results

BLAST vs Swiss-Prot:
sp|Q85ZU5|MATK_HORJU, E-value = 4e-107

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616211Secale cerealeSesamum indicum15.3327.9787.77139forward
CNT30385268Secale cerealeTriticum turgidum94.8289.2198.14860forward
CNT30263944Secale cerealeBrassica rapa31.211.5679.15283forward
CNT3018289Secale cerealeZea mays62.5121.8590.65567forward
CNT30683192Secale cerealeTriticum urartu40.0235.8397.25363forward
CNT30499058Secale cerealeDigitaria exilis34.9574.5991.17317forward

Expression of CNT30185941

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MKVEVYTLVDTKSVFSKIHYDNEKDFYISDQIDQEYPNLINLSKWVY*

Sequence

>CNT30185941
ATACCAATGTCAACCAAGTCAGCCCAAAGATTAGCTATCCATATAACTAAATTAACCAAACCAATAATTTTGTATTTGTAAATGAAGTGAGTCAAAGTTA
AAAACTTTGATGGGTCTTTTCTATATGGGTTGCCCGGGACTCGAACCCGGAACTAGTCGGATGGAGTAGATAATTCTTCCTTGTTACAATAGAGAAAAAT
CCCTCCCCAAATCGTGCTTGCATTTTTCATTGCACACGACTTTCCCTATGTAGAAATAGCCAATTTCTATTCCAAAGAGGAAGTTAGTTCTACTAATTTT
TTTAATTAGTAAGTTGATTCACCTACTCTTTATTATAATAAAATAAAAAGAACATTTCAGAATGAAAAATGGAAAAGTTTTTTCTTGATCATTTATCAAC
CCTTTCTTGTTTCTTAATTTCGTCTAATGATTAATTAAGAGGGTTGACCAGGTCATTGATACGTATAATATCCAAATACCAAATACGCTCAGTGTGTGAT
CCACAGAAAGAAAAAAGAGTTGTTTTGGTGAACATCAAAGAAAAAACTTGCTCTTCTTCCATAAAGAATTCTTCTAAAAATACCGAACCCAATCGTTGCA
TAAAAGTTCGTACCGTGCTTTTATGTTTACGAGCTAAAGTTCTAGCGCATGAAAGTCGAAGTATATACTTTAGTCGATACAAAGTCTGTTTTTTCGAAGA
TCCACTATGATAATGAAAAAGATTTCTACATATCCGACCAAATCGATCAAGAATATCCCAATCTGATAAATCTGTCCAAATGGGTTTACTAATAGGATGC
CCCGATCCAGTACAAAATTGAGCTTTTGATAAGTATCCTATGAGGAGAGTAGCGGGGACTATGGTATCGAATTTTTTCATTCGAGTATCTATTAGAAATG
AATTCTC