Detailed information on CNT30185912


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30307334Secale cerealeTriticum aestivum10092.7695.74282reverse complement
CNT30398345Secale cerealeTriticum turgidum10093.0794.33282forward
CNT3015504Secale cerealeZea mays28.7213.3993.8381reverse complement
CNT3067608Secale cerealeLeersia perrieri48.9444.8189.86138reverse complement
CNT30689291Secale cerealeTriticum urartu96.4581.1995.22272reverse complement
CNT30596339Secale cerealeOryza meridionalis44.3331.2592125forward
CNT30116196Secale cerealeOryza nivara100.3554.0184.45283reverse complement

Expression of CNT30185912

Peptides detected in this lncRNA

>peptide 1 (92 aa)
MVRWSRLRGPSGLGVQRPVILPPLEAGSCRCSVKPASRYACHIMNREAQLSHRPQPVHYTTWNEQASNSTPRPGPQHYNSVHIILMPPLGLQA

Sequence

>CNT30185912
GATGGTTCGTTGGAGTAGGCTGCGAGGCCCAAGTGGCCTAGGAGTGCAGCGGCCCGTTATCCTTCCACCGTTGGAAGCGGGCAGTTGTCGCTGCTCTGTG
AAGCCAGCCTCACGCTATGCCTGCCACATTATGAACCGTGAGGCCCAGCTTTCGCATAGGCCCCAACCGGTCCACTACACAACTTGGAACGAGCAGGCCA
GCAATAGCACACCCAGACCAGGCCCGCAGCACTACAACAGCGTCCACATCATCTTAATGCCCCCACTTGGGTTACAAGCTCT