Detailed information on CNT30185797


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522415Secale cerealeSetaria italica28.8120.995.7170forward
CNT30445279Secale cerealeSaccharum spontaneum30.8612.8493.3375reverse complement
CNT30339268Secale cerealeEragrostis tef29.6324.5795.8372forward
CNT30596008Secale cerealeOryza meridionalis34.9827.5194.1285forward
CNT30369785Secale cerealeOryza glumipatula34.1621.2893.9883reverse complement
CNT30603809Secale cerealeOryza punctata34.5727.3695.2484forward

Expression of CNT30185797

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MWQAQREAGFTEQRQLPASNGGRITGRCT

Sequence

>CNT30185797
GAGAGCTTGTAACCCGAGTGGGAGCATTAAAGTGATGTGGACGTTGTTGTAGTGTTGCGGGTCTGGTCTGGGTGTGCGACTGCTGGCCCGCCCGTTCCAA
GTTGCGTAGTGGACCGCCTGGGGCCTATGCGAAAGCTGGGCCTCACGGTCTATAATGTGGCAGGCACAGCGTGAGGCTGGCTTCACAGAGCAGCGACAAC
TGCCCGCTTCCAACGGTGGAAGGATAACGGGCCGCTGCACTCC