Detailed information on CNT30185403


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30195089Secale cerealePisum sativum31.44.6695.0681reverse complement
CNT30222305Secale cerealeHordeum vulgare35.666.8910092reverse complement
CNT30576783Secale cerealeOryza barthii35.6615.3392.3992forward

Expression of CNT30185403

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MENAHSMSIPRRSIPEIWAWRSPLSSEVLNHLPE

>peptide 2 (58 aa)
SLSRCLDGEMVDTRDSKSRAEERGGSSPLQDTRDSKSRAEERGGSSPLQGIIWRMLIQ*

Sequence

>CNT30185403
TTCACTTTCAAGATGCCTTGATGGTGAAATGGTAGACACGCGAGACTCAAAATCTCGTGCTGAAGAGCGTGGAGGTTCGAGTCCTCTTCAAGACACGCGA
GACTCAAAATCTCGTGCTGAAGAGCGTGGAGGTTCGAGTCCTCTTCAAGGCATAATATGGAGAATGCTCATTCAATGAGCATTCCCCGTAGAAGTATTCC
GGAAATCTGGGCCTGGCGCTCTCCTCTATCTTCTGAGGTCCTTAACCATCTCCCTGAG